CN191703

Overview
NameCN191703
Unique NameCN191703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191703 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 390.193 bits (1001), Expect = 8.566e-108
Identity = 189/240 (78.75%), Postives = 215/240 (89.58%), Query Frame = -3
Query:  178 VDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPMDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 897
            VDQFV+AVKQ ALANKRWVPP GKGTLYIRPLL+GSGP+LGLGPAPEYTF+ YASPVGNYFKEG A LNLY+EEE+VRAAPGGAGGVK+I+NYAPVLKAL RAKSRGFSDVLYLDSV +K +EE SSCN+FVVKG  ISTPATNGTILEGITR+SV+EIA D GYQV E+ + +DE+++AD+VFCTGTAVVVAPVG+ITYQ KRVE+KTG  SV Q+L S LVGIQTG+IED KGW  ++
Sbjct:  148 VDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDI 387          
BLAST of CN191703 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.680e-87
Identity = 155/241 (64.32%), Postives = 194/241 (80.50%), Query Frame = -3
Query:  178 VDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPMDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGS-RSVYQELYSTLVGIQTGVIEDKKGWTVEV 897
            V+QFV+AV +  LANKRWVPPPGKG+LY+RPLL+G+G VLGL PAPEYTF+ Y SPVGNYFKEG AP+NL +E EF RA PGG GGVK I NYA VLKA   AK++G+SDVLYLD + ++ +EEVSSCNIF+VK NVISTP   GTIL GITR+S+I++AR  G+QVEER + +DEL+ AD+VFCTGTAVVV+PVGS+TY+ KRV +  G+  +V ++LY+ L  +Q G+IED   WTV +
Sbjct:  172 VEQFVEAVTETVLANKRWVPPPGKGSLYVRPLLMGTGAVLGLAPAPEYTFIIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCIYKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSMIDVARTQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSVTYKGKRVSYGEGTFGTVSKQLYTVLTSLQMGLIEDNMKWTVNL 412          
BLAST of CN191703 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 1.089e-86
Identity = 153/241 (63.49%), Postives = 196/241 (81.33%), Query Frame = -3
Query:  178 VDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPMDELINADQVFCTGTAVVVAPVGSITYQNKRVEF-KTGSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 897
            V+QFV+AVK   LANKRW+PPPGKG+LYIRPLL+G+G VLGL PAPEYTFL + SPVGNYFKEG AP+NL +E EF RA PGG GGVK I NYA VLKA   AK++G+SDVLYLD ++++ +EEVSSCNIF+VK NVISTP   GTIL GITR+S+IE+AR  G++VEER + +DEL+ AD+VFCTGTAVV++PVGSITY+++R  + + G  +V ++LY++L  +Q G+ ED   WTV++
Sbjct:  174 VEQFVEAVKTTVLANKRWIPPPGKGSLYIRPLLMGTGAVLGLAPAPEYTFLIFVSPVGNYFKEGVAPINLIVETEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCLHKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSIIEVARSQGFKVEERNVTVDELVEADEVFCTGTAVVLSPVGSITYKSQRFSYGEDGFGTVSKQLYTSLTSLQMGLSEDNMNWTVQL 414          
BLAST of CN191703 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 5.403e-86
Identity = 157/240 (65.42%), Postives = 189/240 (78.75%), Query Frame = -3
Query:  178 VDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPMDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 897
            V QF++ VKQ  LAN+RWVPPPGKG+LY+RPLL GSG  LG+  A EYTFL + SPV NYFKEG+A LNLY+EE   RA  GG GGVKAISNY PVL+ + RAKSRGFSDVLYLD+   KN+EEVS+ NIF+VKGN I TPAT+GTIL GITR+S+IEIA D GY+VEER +P++EL  A++VFCTGTA  VA VGSIT++N R E+K G   V Q+L S LVGIQTG I+D K W +++
Sbjct:  144 VHQFIEGVKQTVLANRRWVPPPGKGSLYLRPLLFGSGASLGVAAASEYTFLVFGSPVQNYFKEGTAALNLYVEEVIPRAYLGGTGGVKAISNYGPVLEVMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNTIVTPATSGTILGGITRKSIIEIALDLGYKVEERSVPVEELKEAEEVFCTGTAAGVASVGSITFKNTRTEYKVGDGIVTQQLRSILVGIQTGSIQDTKDWVLQI 383          
BLAST of CN191703 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.738e-84
Identity = 144/240 (60.00%), Postives = 196/240 (81.67%), Query Frame = -3
Query:  178 VDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPMDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 897
            ++QFV+AVKQ  LANK+WVPPPGKGTLYIRPLL+GSG  LG+ PAPEYTFL YASPVG+Y K  S  LNL ++ ++ RA  GG GGVK+ +NY+PV+K+L+ AKS GFSDVL+LD+   +N+EE+++CNIF+VKGN++STP T+GTIL G+TR+S+ E+A D GYQVEER + +DEL+ A++VFCTGTAVVV  V ++T+ +K+V+++TG  ++  +L+S L  IQ GV+EDKKGW V++
Sbjct:  113 LEQFVEAVKQTVLANKKWVPPPGKGTLYIRPLLLGSGATLGVAPAPEYTFLIYASPVGDYHKVSSG-LNLKVDHKYHRAHSGGTGGVKSCTNYSPVVKSLLEAKSAGFSDVLFLDAATGRNIEELTACNIFIVKGNIVSTPPTSGTILPGVTRKSISELAHDIGYQVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKYRTGEAALSTKLHSMLTNIQMGVVEDKKGWMVDI 351          
BLAST of CN191703 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.775e-82
Identity = 144/239 (60.25%), Postives = 189/239 (79.08%), Query Frame = -3
Query:  178 DQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPMDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 894
            +QFV+AVKQ  LAN +WVPPPGKG LYIRPLLIG+G VLG+  APEYTFL Y SPVGNY K  S  LNL ++    RA  GG GGVK+ +NY+PV+K+LI AKS GFSDVL+LD+   KN+EEVS+CNIF++KGN++STP T+GTIL GITR+S+ E+ARD GY+V+ER + +DEL+ A++VFCTGTAVV+  V ++T+ +KRV+++TG  +   +L+  L  IQ GV+EDKKGW +E+
Sbjct:  117 EQFVEAVKQTVLANNKWVPPPGKGALYIRPLLIGTGAVLGVASAPEYTFLIYTSPVGNYHKASSG-LNLKVDHNHRRAHFGGTGGVKSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEEVSTCNIFILKGNIVSTPPTSGTILPGITRKSICELARDIGYEVQERDLSVDELLEAEEVFCTGTAVVIKAVETVTFHDKRVKYRTGEEAFSTKLHLILTNIQMGVVEDKKGWMMEI 354          
BLAST of CN191703 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 3.068e-81
Identity = 140/240 (58.33%), Postives = 184/240 (76.67%), Query Frame = -3
Query:  178 VDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPMDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 897
            VDQFV A+KQ+ALANK+W+PPPGKGTLYIRP+L GSGP+LG  P PE TF A+A PVG Y K+ S  LNL IE++F RA P G GGVK+I+NY PV   L  AK +GFSD+L+LD+   KN+EE+ + N+F++KGNV+STP   GTIL G+TR  V+E+ RD+GYQVEER IP+ + ++AD+ FCTGTA +V  + S+T+++K+  FKTG  ++  +LY TL  IQTG +ED KGWTVE+
Sbjct:  112 VDQFVSAIKQVALANKKWIPPPGKGTLYIRPILFGSGPILGSFPIPETTFTAFACPVGRYHKDNSG-LNLKIEDQFRRAFPSGTGGVKSITNYCPVWIPLAEAKKQGFSDILFLDAATGKNIEELFAANVFMLKGNVVSTPTIAGTILPGVTRNCVMELCRDFGYQVEERTIPLVDFLDADEAFCTGTASIVTSIASVTFKDKKTGFKTGEETLAAKLYETLSDIQTGRVEDTKGWTVEI 350          
BLAST of CN191703 vs. ExPASy Swiss-Prot
Match: ILVE2_BACSU (Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis GN=ilvK PE=1 SV=5)

HSP 1 Score: 208.379 bits (529), Expect = 4.617e-53
Identity = 107/246 (43.50%), Postives = 152/246 (61.79%), Query Frame = -3
Query:  178 DQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPMDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGWTVEV 894
            +Q ++ +KQ+   +K W+P     +LYIRP +I + P LG+  +  Y  L   SPVG+Y+KEG  P+ + +E EFVRA  GG G  K   NYA  LKA   A+ +GFS VL+LD + +K +EEV S NIF      I TP  NG+ILEGITR SVI + + +G QV ER I +DE+I A      ++ F TGTA V++PVG + +Q++ +    G +  + ++LY T+ GIQ G + D+ GWT EV
Sbjct:  111 EQVLEGLKQLVAIDKDWIPNAEGTSLYIRPFIIATEPFLGVAASHTYKLLIILSPVGSYYKEGIKPVKIAVESEFVRAVKGGTGNAKTAGNYASSLKAQQVAEEKGFSQVLWLDGIEKKYIEEVGSMNIFFKINGEIVTPMLNGSILEGITRNSVIALLKHWGLQVSERKIAIDEVIQAHKDGILEEAFGTGTAAVISPVGELIWQDETLSINNGETGEIAKKLYDTITGIQKGAVADEFGWTTEV 356          
BLAST of CN191703 vs. ExPASy Swiss-Prot
Match: ILVE_STAAR (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.621e-48
Identity = 101/248 (40.73%), Postives = 148/248 (59.68%), Query Frame = -3
Query:  172 QFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFK-EGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPMDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGWTVEV*K 891
            + ++ +KQ+    + WVP     +LYIRP +  +  VLG+G + +Y  L   SP G Y+  E   P  +Y+E+E+VRA  GG G  K   NYA  L A   A   G+  VL+LD V +K +EEV S NIF V+   + TP  NG+IL GITR+S+IE+A++ GY+VEER + +DEL  +       +VF +GTA V++PVG++ Y+++ +      +  + Q+LY    GIQ G +EDK GW V V K
Sbjct:  110 ELLEGLKQLVDLEREWVPEGEGQSLYIRPFVFATEGVLGVGASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPK 357          
BLAST of CN191703 vs. ExPASy Swiss-Prot
Match: ILVE_STAES (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ilvE PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.840e-48
Identity = 103/249 (41.37%), Postives = 149/249 (59.84%), Query Frame = -3
Query:  172 DQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAP-LNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPMDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTGS-RSVYQELYSTLVGIQTGVIEDKKGWTVEV*K 894
            +  ++ +KQ+    + WVP     +LYIRP +  +  VLG+  + +Y  L   SP G Y+   +     +Y+E+E+VRA  GG G  K   NYA  L A   A   G+  VL+LD V +K VEEV S NIF V+   + TPA NG+IL GITR+S+I++A D GY+VEER + ++EL NA       +VF +GTA V++PVG++ Y+++ +         + Q+LY T  GIQ+G +EDK GW VEV K
Sbjct:  109 EALLEGLKQLIDVERDWVPEGEGQSLYIRPFVFATEGVLGVRSSHQYKLLIILSPSGAYYGGDTLKSTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYVEEVGSMNIFFVENGKVVTPALNGSILPGITRKSIIQLAEDLGYEVEERRVSIEELFNAYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNEPGKITQKLYDTYTGIQSGKLEDKYGWRVEVPK 357          
The following BLAST results are available for this feature:
BLAST of CN191703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
BCAT2_ARATH8.566e-10878.75Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT3_ARATH1.680e-8764.32Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT5_ARATH1.089e-8663.49Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT1_ARATH5.403e-8665.42Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT6_ARATH1.738e-8460.00Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT7_ARATH2.775e-8260.25Putative branched-chain-amino-acid aminotransferas... [more]
BCAT4_ARATH3.068e-8158.33Probable branched-chain-amino-acid aminotransferas... [more]
ILVE2_BACSU4.617e-5343.50Branched-chain-amino-acid aminotransferase 2 OS=Ba... [more]
ILVE_STAAR2.621e-4840.73Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAES5.840e-4841.37Probable branched-chain-amino-acid aminotransferas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0005K20_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005K20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191703 ID=CN191703; Name=CN191703; organism=Citrus sinensis; type=EST; length=899bp
TTTTTTTTTTTTTTTTTAATGTTCATATTTCTTTCATTTATTAAGAGCAC
CTTTGATGGGATTTAAAAATACATGGAAACTTTTTTTTCTCATAAAGATA
CTATGGGTTCAACAGCATTTTGTAACGACATTCTGTAAGTAAGCATAGCA
TTATTGGTTTCTAAAAATTGATTTTTAAACCTCCACAGTCCATCCTTTCT
TATCCTCAATAACACCCGTTTGAATTCCTACGAGAGTTGAGTACAATTCC
TGATACACCGAGCGTGACCCTGTTTTAAATTCAACTCTTTTATTTTGATA
TGTGATACTGCCCACTGGAGCAACAACTACAGCGGTTCCAGTGCAAAATA
CTTGGTCGGCATTGATCAGTTCGTCCATAGGAATAACACGTTCCTCAACC
TGATAGCCATAATCCCTGGCAATTTCAATTACACTTCTTCTGGTAATCCC
TTCAAGAATAGTTCCATTTGTAGCGGGAGTTGAAATTACATTGCCCTTTA
CAACAAAAATGTTACAAGAAGAGACTTCCTCCACATTTTTCCTATTGACC
GAGTCAAGGTACAAGACATCCGAAAATCCTCTGCTCTTGGCTCGGATTAA
TGCTTTCAGAACAGGAGCATAATTGCTGATTGCTTTTACCCCTCCAGCGC
CGCCGGGGGCAGCACGGACAAATTCCTCTTCAATGTACAAATTCAGTGGT
GCCGAACCTTCCTTGAAATAGTTTCCGACAGGGGAGGCATATGCGAGGAA
AGTGTATTCAGGTGCTGGACCCAAACCCAACACAGGGCCGCTTCCTATGA
GCAATGGCCTGATGTACAGTGTGCCTTTTCCTGGAGGAGGAACCCAACGC
TTGTTAGCAAGAGCTATTTGTTTCACAGCGTCGACAAACTGATCAACGG
back to top