CN191700

Overview
NameCN191700
Unique NameCN191700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length489
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN191700 vs. ExPASy Swiss-Prot
Match: Y2766_ARATH (Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 8.986e-56
Identity = 103/123 (83.74%), Postives = 117/123 (95.12%), Query Frame = 1 
Query:  121 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGVKQI 489
            TVLVTGAGGRTGQIVYKKLKERSEQ+ ARGLVRT+ESK+KI G D++FIGDIRD+ SI PA++GIDAL+ILTSAVP+MKP FDP+KGGRPEF+F++GAYPEQVDWIGQKNQIDAAKAAGVKQI
Sbjct:   78 TVLVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESKEKINGEDEVFIGDIRDTASIAPAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGVKQI 200
[Close]
BLAST of CN191700 vs. ExPASy Swiss-Prot
Match: Y5224_ARATH (Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 7.368e-50
Identity = 95/123 (77.24%), Postives = 107/123 (86.99%), Query Frame = 1 
Query:  121 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGVKQI 489
            TVLVTGA GRTGQIVYKKLKE S+++ A+GLVR+ + K+KIGG  D+FIGDI D++SI PA QGIDAL+ILTSAVPKMKP FDP KGGRPEF FE+G YPEQVDWIGQKNQIDAAK AGVK I
Sbjct:    6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHI 128
The following BLAST results are available for this feature:
BLAST of CN191700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y2766_ARATH8.986e-5683.74Uncharacterized protein At2g37660, chloroplastic O... [more]
Y5224_ARATH7.368e-5077.24Uncharacterized protein At5g02240 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005K18_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005K18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191700 ID=CN191700; Name=CN191700; organism=Citrus sinensis; type=EST; length=489bp
GCTCACGCTTTCCGCGCTCGCTATTCTCCTTCTTCACTAACATCACTTCC
GAGAACGAGATACCGAAGGAGTTGCGTCAGTAAAACCGAAGCAGTCAAAG
TTTTATCGATGGCTAAGAGTACCGTTCTTGTCACCGGCGCTGGTGGTCGA
ACCGGTCAAATAGTTTATAAGAAATTAAAGGAGAGGTCAGAGCAATATGC
TGCTAGAGGTTTGGTCAGAACTGAGGAGAGCAAGCAGAAAATTGGCGGAG
CAGATGATCTTTTTATTGGTGACATAAGGGACTCTAATAGCATCATTCCT
GCAATCCAAGGAATCGATGCTCTCATAATTCTCACAAGTGCAGTACCAAA
GATGAAACCTGATTTTGATCCTGCCAAAGGTGGAAGGCCTGAGTTCTACT
TTGAAGAGGGTGCATATCCTGAACAGGTTGATTGGATTGGTCAGAAAAAT
CAAATTGATGCTGCTAAGGCTGCTGGAGTGAAGCAAATT
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