CN191690

Overview
NameCN191690
Unique NameCN191690
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191690 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 2.981e-60
Identity = 116/170 (68.24%), Postives = 129/170 (75.88%), Query Frame = 3
Query:   39 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPA---TQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 539
            MS+ + I LKS DGE+FE++EAVALES TIKHMIEDDC DNGIPLPNVT KIL+KV+EYCK+HVE      T                  +EDLK+WD++F+KVDQ TLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP         NQWAF
Sbjct:    1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAF 170          
BLAST of CN191690 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 8.675e-60
Identity = 115/165 (69.70%), Postives = 127/165 (76.97%), Query Frame = 3
Query:   45 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 539
            S K IVLKS DGESFEVEEAVALES TI HM+EDDC DNG+PLPNVT KILAKV+EYCK+HVE  A++                 ++DLK+WD DF+K+DQATLF+LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNIKNDFTP         NQWAF
Sbjct:    2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASK-------AEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAF 159          
BLAST of CN191690 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 6.433e-55
Identity = 106/163 (65.03%), Postives = 123/163 (75.46%), Query Frame = 3
Query:   51 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 539
            KMI+LKS DGESFE+EEAVA++S TIKHMIEDDCADNGIPLPNVTG ILAKV+EYCKKHVE  A                    ++LK+WD++FVKVDQ TLFDLILAANYLNI GLLDLTC+ VAD ++GKTPE++R  FNIKND+TP         N+WAF
Sbjct:    6 KMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAA------EAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAF 162          
BLAST of CN191690 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.070e-53
Identity = 104/163 (63.80%), Postives = 118/163 (72.39%), Query Frame = 3
Query:   51 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 539
            KMI+LKS DGESFEVEEAVA+ES TIKHMIEDDC DNGIPLPNVTG ILAKV+EYCKKHVE  A                     +LK+WD DFVKVD  TLFDL+ AANYLNI GLLDLTC+ VAD ++GKTP ++R+ FNIKND+TP         N+WAF
Sbjct:    6 KMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAAA------EAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAF 162          
BLAST of CN191690 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.797e-50
Identity = 102/165 (61.82%), Postives = 116/165 (70.30%), Query Frame = 3
Query:   45 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 539
            S KMIVL S DG+SFEVEEAVA++S TI HM+EDDC  +GIPL NV  KIL KV+EYCKKH    A                   EEDL +WD  F+ ++Q+T+F+LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNI+NDFTP         NQWAF
Sbjct:    2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHVDEANP---------------ISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAF 151          
BLAST of CN191690 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.039e-49
Identity = 101/166 (60.84%), Postives = 115/166 (69.28%), Query Frame = 3
Query:   45 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKK-HVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 539
            S KMIVL S DG+SFEVEEAVA++S TI HM+EDDC  +GIPL NV  KIL KV+EYCKK HV+                      EEDL  WD  F+ ++Q+T+F+LILAANYLNIK L DLTCQTVADMIKGKTPEEIR TFNI+NDFTP         NQWAF
Sbjct:    2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHVD----------------EANPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAF 151          
BLAST of CN191690 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.912e-44
Identity = 91/165 (55.15%), Postives = 112/165 (67.88%), Query Frame = 3
Query:   51 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKV--DQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 539
            KM++L S DGESF+VEEAVA++S TI HMIEDDC  NG+P+ NVTG IL+KV+EYCKKHV   +  +                +++LK WD +F+K     +TLFD++LAANYLNIK LLDL CQTVADMI GK P+EIR    I+NDFTP         NQWAF
Sbjct:    3 KMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTE--------------ESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAF 153          
BLAST of CN191690 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 5.649e-43
Identity = 92/165 (55.76%), Postives = 104/165 (63.03%), Query Frame = 3
Query:   45 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 539
            S K I+LKS DG SFEVEE  A +  TI HM EDDC DNGIPLP VTGKIL  V+EYC KH  V A                   +EDLK WD +F++  Q+T+FDLI+AANYLNIK LLDL CQTVADMIK  T E  RK FNI+ND+T          NQW F
Sbjct:    2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKH-HVDAANPCS--------------DEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGF 151          
BLAST of CN191690 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.258e-42
Identity = 91/166 (54.82%), Postives = 108/166 (65.06%), Query Frame = 3
Query:   45 SPKMIVLKSCDGESFEVEEAVALE-STTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 539
            S K I+LKS DG SFEVEE  A +    I HM E+DC DNGIPLPNVTGKILA V+EYC KH  V A                   ++DLK WD +F++ D +T+FDLI AANYLNIK L DL CQTVA++IKG TPE+IR+ FNI+ND TP         N+WAF
Sbjct:    2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKH-HVDAANPCS--------------DDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAF 152          
BLAST of CN191690 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.782e-42
Identity = 95/168 (56.55%), Postives = 110/168 (65.48%), Query Frame = 3
Query:   39 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 539
            MSS K IVL S DGESFEVEEAVA +   ++HMIEDDC    +PL NVTGKIL+ VVEYCKKHV                        ++ K+WD +F+K  DQ T+F L+LAANYLNIKGLLDL+ QTVAD IK KTPEEIR+ FNI+NDFTP         N WAF
Sbjct:    1 MSSNK-IVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHV-------------------VDEESDEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAF 148          
The following BLAST results are available for this feature:
BLAST of CN191690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
SKP1B_ARATH2.981e-6068.24SKP1-like protein 1B OS=Arabidopsis thaliana GN=SK... [more]
SKP1A_ARATH8.675e-6069.70SKP1-like protein 1A OS=Arabidopsis thaliana GN=SK... [more]
ASK4_ARATH6.433e-5565.03SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK... [more]
ASK3_ARATH2.070e-5363.80SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK... [more]
ASK11_ARATH2.797e-5061.82SKP1-like protein 11 OS=Arabidopsis thaliana GN=AS... [more]
ASK12_ARATH4.039e-4960.84SKP1-like protein 12 OS=Arabidopsis thaliana GN=AS... [more]
ASK13_ARATH3.912e-4455.15SKP1-like protein 13 OS=Arabidopsis thaliana GN=AS... [more]
ASK10_ARATH5.649e-4355.76SKP1-like protein 10 OS=Arabidopsis thaliana GN=AS... [more]
ASK9_ARATH1.258e-4254.82SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK... [more]
ASK14_ARATH4.782e-4256.55SKP1-like protein 14 OS=Arabidopsis thaliana GN=AS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005K10_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005K10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191690 ID=CN191690; Name=CN191690; organism=Citrus sinensis; type=EST; length=572bp
GAGGCAAAGTCAGATTTGTTTTCTTTCTTCTCGAAACGATGTCGTCTCCT
AAGATGATCGTACTCAAGAGCTGTGACGGCGAGTCGTTCGAGGTCGAGGA
GGCTGTCGCGCTTGAGTCGACGACCATCAAGCACATGATCGAGGACGACT
GCGCCGATAACGGCATCCCGTTACCGAACGTGACGGGCAAGATCCTGGCG
AAGGTGGTTGAGTATTGCAAGAAACACGTGGAGGTTCCTGCGACCCAGGA
TAGCAACAACAGCGGCGCCAACAGCAACGGTACTGCCACTAACGGTGGTG
AGGAGGATCTCAAAAGCTGGGACACTGACTTCGTCAAAGTTGACCAGGCC
ACTCTCTTCGATCTCATCCTGGCAGCAAACTACCTGAACATCAAGGGGCT
GCTGGACCTTACCTGCCAGACTGTTGCTGACATGATCAAGGGAAAGACTC
CGGAGGAGATTCGAAAGACCTTTAACATCAAGAATGACTTCACTCCAGAG
GAGGAAGAAGAGGTCCGTANGGAGAACCAGTGGGCTTTTTGAGTGAAAGT
TGTTTCAACAAAGACAATTTTT
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