CN191688

Overview
NameCN191688
Unique NameCN191688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191688 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.329e-13
Identity = 62/228 (27.19%), Postives = 111/228 (48.68%), Query Frame = -1
Query:  113 SRRRMDVPCLDMLQFHWWD-YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----GIPVVSNQVQHSVVDMRPQQK-MAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGV-RLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKDLLG 775
            S  R+++  +D+ Q HW   + N GYLD L    D  E+G +K V ++N+  +RLR   E     GIP+ SNQV +S++   P+Q  +   C   GV LI Y  +  G L+ K+   N        P + P  + Y R        ++ Q LL  +K+I   +  +   +A+ +++ Q    G++I +     AE  ++       SL +++V+ ++ +  + K ++G
Sbjct:  164 SLSRLELSSVDLYQLHWPGLWGNEGYLDGLG---DAVEQGLVKAVGVSNYSEKRLRDAYERLKKRGIPLASNQVNYSLIYRAPEQTGVKAACDELGVTLIAYSPIAQGALTGKYTPEN--------PPSGPRGRIYTREF-----LTKLQPLLNRIKQIGENYSKTPTQIALNWLVAQ----GNVIPIPGAKNAEQAKEFAGAIGWSLTDNEVSELRSLASEIKPVVG 371          
BLAST of CN191688 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.669e-11
Identity = 54/223 (24.22%), Postives = 100/223 (44.84%), Query Frame = -1
Query:  134 VRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFA--GPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTK 796
            +R  ++ S +R+    +D+   H+ D   P   +    L +LK+EGKIK +  +N D ++L+    +G   V  Q ++S++    ++++   C+  G+  I Y  +  GLL+ KF    +   F    P     +     + VD              LK +A +       VA+ ++L +PA+   + G +    E +QD      + L ED+VN I ++ K
Sbjct:  105 LRSEVEKSLKRLKTDYIDLYYVHFPDGKTP-LAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVF-QAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTGKFTQDTVFDDFRKDKPQFQGETFIHNLKKVD-------------KLKAVAEEKQADTAHVALAWLLTRPAIDAIIPGAK--RPEQLQDNLKTLNIELTEDEVNFISDIFK 310          
The following BLAST results are available for this feature:
BLAST of CN191688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y1669_ARATH2.329e-1327.19Uncharacterized oxidoreductase At1g06690, chloropl... [more]
YCCK_BACSU1.669e-1124.22Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005K09_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005K09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191688 ID=CN191688; Name=CN191688; organism=Citrus sinensis; type=EST; length=811bp
ACCCAAAAATAAAGGCACCAAGGGGCTTTCATTAGTAACGGGCAAGTCAC
AGGAAGTTTGGAAAAAGAGGTCAAAATCAACGCCTATACTCGTCTCCACA
ATCACCAATCACTCCAAGCAAATCCTTCCCCTTTTTGGTAACTTCTTGTA
TGCTGTTAACATCATCTTCATCAAGAGAGAGCATGAAGATGGCATTGGTG
TCCTGTATATGTTCTGCTAAACCGAGTCTCACCCCTATCATTGATCCTGC
AACTGCTGGCTGGTCTAGTATGTATCTTACAGCAACAACTGGAATTGATA
CCCCATGTTTGGAAGCTATTCTTTTCAGTGTCTGAAGCAAAACTTGGAAC
TGACTCCACCCTCCCCAGGCATCAACCATCCTTTTGTACTTCTGAAGGGA
CGGAGTGTTCAATGGGGGGCCAGCAAAAGGAATCGACAAGTTGGTGTCAA
GGAACTTTTCAGATAACAAACCACCCATTACTGTGCCATACGTTATTAGT
TTGACTCCTGTGAGCTGACAAAGCTCTGCCATTTTCTGCTGGGGACGCAT
GTCAACAACTGAATGTTGCACCTGATTGCTAACAACAGGGATACCATTCT
CCAGTATTATTCGCAGTCTTTCCGTGTCAAAATTTGTCAAAGCAACAGTC
TTAATTTTACCTTCTTCTTTCAGATCTGTAAGGTGATTTAGTGCATCAAG
GTAACCAGGATTAGAATAATCCCACCAATGAAATTGAAGCATGTCCAAGC
AAGGTACATCCATCCGCCTCCTTGATACATCGATGCTCTCTCTAACAATG
CTACTTGTCAT
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