CN191684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN191684 vs. ExPASy Swiss-Prot
Match: NUC_ARATH (Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.170e-45 Identity = 84/118 (71.19%), Postives = 93/118 (78.81%), Query Frame = 1 Query: 7 TNKEVRKKVYICPEKSCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKICGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARFTTISSTNPQAAAAIP 360 T+KEVRK+VY+CPEK+CVHH SRALGDLTGIKKHF RKHG YAVQSDWKAHSK CGTREYRCDCGT+FSR+DSFITHRAFCDALAEE+A+ +S N AAA P Sbjct: 98 TSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETAKINAVSHLNGLAAAGAP 215
BLAST of CN191684 vs. ExPASy Swiss-Prot
Match: MGP_ARATH (Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 4.448e-45 Identity = 84/116 (72.41%), Postives = 91/116 (78.45%), Query Frame = 1 Query: 7 TNKEVRKKVYICPEKSCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKICGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARFTTISSTNPQAAAA 354 T+KEVRK+VY+CPEKSCVHH P+RALGDLTGIKKHF RKHG YAVQSDWKAHSK CGTREYRCDCGT+FSR+DSFITHRAFCDALAEE+AR S AA A Sbjct: 102 TSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARLNAASHLKSFAATA 217
BLAST of CN191684 vs. ExPASy Swiss-Prot
Match: JKD_ARATH (Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 3.188e-43 Identity = 78/107 (72.90%), Postives = 88/107 (82.24%), Query Frame = 1 Query: 19 VRKKVYICPEKSCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKICGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARFTTISSTNP 339 ++KKVYICP K+CVHHD SRALGDLTGIKKH+SRKHG YAVQSDWKAH+K CGTREY+CDCGTLFSRKDSFITHRAFCDAL EE AR +++S+ NP Sbjct: 119 IKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNNNP 225 The following BLAST results are available for this feature:
BLAST of CN191684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN191684 ID=CN191684; Name=CN191684; organism=Citrus sinensis; type=EST; length=563bpback to top |