CN191671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN191671 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.489e-46 Identity = 93/117 (79.49%), Postives = 97/117 (82.91%), Query Frame = -1 Query: 420 KEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 770 KEPNTKT+S D FEFNSKFTD+MRRIKIPLPP DRRYAIDA+IVRIMKSRKVLGHQQLV ECVEQL RMFKPD KAIKKR+EDLITRDYLERDK NPNMFRYLA Sbjct: 622 KEPNTKTVSQNDAFEFNSKFTDRMRRIKIPLPPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738
BLAST of CN191671 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 3.181e-17 Identity = 56/121 (46.28%), Postives = 65/121 (53.72%), Query Frame = -1 Query: 420 KEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 770 K P K + D F FN +F K+ RIKI DR+Y IDA+IVRIMK RK LGH LV E QL KP +KKRIE LI RDY+ERDK NPN + Y+A Sbjct: 641 KSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDNPNQYHYVA 759
BLAST of CN191671 vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.579e-16 Identity = 55/121 (45.45%), Postives = 65/121 (53.72%), Query Frame = -1 Query: 420 KEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 770 K P K + D F FN+ F K+ RIKI DR+Y IDA+IVRIMK RK LGH LV E QL KP +KKRIE LI RDY+ERDK +PN + Y+A Sbjct: 641 KSPKGKEVEDGDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDSPNQYHYVA 759
BLAST of CN191671 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15 Identity = 55/121 (45.45%), Postives = 62/121 (51.24%), Query Frame = -1 Query: 420 KEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 770 K P K I D F N F K+ RIKI DR+Y IDA+IVRIMK RK L H LV E QL KP +KKRIE LI RDY+ERDK NPN + Y+A Sbjct: 777 KNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQYNYIA 895
BLAST of CN191671 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15 Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = -1 Query: 420 TKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 758 +K+I +D F FN+KF K+ R+K+ DR++ I+ASIVRIMK+RK L H LV E ++QL F P+ +KKRIE LI R+YLER K + ++ Y+A Sbjct: 653 SKSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEEKETRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQDRKIYNYMA 769
BLAST of CN191671 vs. ExPASy Swiss-Prot
Match: CUL3_SCHPO (Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14 Identity = 45/123 (36.59%), Postives = 60/123 (48.78%), Query Frame = -1 Query: 420 KEPNTKTISPTDHFEFNSKFTDKMRRIKIP------LPPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 770 K+P + ++ D F FN F + RIKI + R++ DA IVR+MK RKV H QL+ E QL F P IK+RIE LI R+YL+R N ++ YLA Sbjct: 663 KDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADNGRIYEYLA 785
BLAST of CN191671 vs. ExPASy Swiss-Prot
Match: CUL4_DICDI (Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.634e-13 Identity = 49/117 (41.88%), Postives = 65/117 (55.56%), Query Frame = -1 Query: 420 TKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 758 TK I TD F FNSKF+ K+ +IK+ DR+Y +DA+IVRIMK+RK L H L+ E V L F+P +KKRIE LI ++YL RD N ++ Y+A Sbjct: 688 TKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLL--KFQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
BLAST of CN191671 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.134e-13 Identity = 48/123 (39.02%), Postives = 63/123 (51.22%), Query Frame = -1 Query: 420 KEPNTKTISPTDHFEFNSKFTDKMRRIKIPL------PPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 770 KEP +K I F N +FT K+ R+KI DR++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL R + ++ Y+A Sbjct: 646 KEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN191671 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.134e-13 Identity = 48/123 (39.02%), Postives = 63/123 (51.22%), Query Frame = -1 Query: 420 KEPNTKTISPTDHFEFNSKFTDKMRRIKIPL------PPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 770 KEP +K I F N +FT K+ R+KI DR++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL R + ++ Y+A Sbjct: 646 KEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN191671 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.134e-13 Identity = 48/123 (39.02%), Postives = 63/123 (51.22%), Query Frame = -1 Query: 420 KEPNTKTISPTDHFEFNSKFTDKMRRIKIPL------PPXXXXXXXXXXXXXDRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 770 KEP +K I F N +FT K+ R+KI DR++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL R + ++ Y+A Sbjct: 646 KEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768 The following BLAST results are available for this feature:
BLAST of CN191671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CN191671 ID=CN191671; Name=CN191671; organism=Citrus sinensis; type=EST; length=773bpback to top |