CN191668

Overview
NameCN191668
Unique NameCN191668
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191668 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.432e-67
Identity = 116/135 (85.93%), Postives = 126/135 (93.33%), Query Frame = -3
Query:  342 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQV 746
            GGWCNPPQQHFDLSQPVF++IAQY+AGIVPV+YRRVPC R+GGIRFTINGHSYFNLVLITNVGGAGDV +  +KGSRT WQ MSRNWGQNWQSNSYLNGQSLSFKVTTSDG T+VSNNVA AGWSFGQTF+G Q+
Sbjct:  115 GGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTGAQL 249          
BLAST of CN191668 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 5.071e-65
Identity = 111/134 (82.84%), Postives = 123/134 (91.79%), Query Frame = -3
Query:  345 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 746
            GGWCNPP  HFDLSQPVF++IAQYKAG+VPVSYRRVPC R+GGIRFTINGHSYFNLVL+TNVGGAGDV +V++KGSRT WQ MSRNWGQNWQSN+ LNGQ+LSFKVT SDG TVVSNN+APA WSFGQTF+G Q
Sbjct:  118 GGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQ 251          
BLAST of CN191668 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 6.623e-65
Identity = 113/134 (84.33%), Postives = 124/134 (92.54%), Query Frame = -3
Query:  345 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 746
            GGWCNPP +HFDL+QPVF++IAQY+AGIVPVSYRRVPC R+GGIRFTINGHSYFNLVLITNVGGAGDV + +IKGSRT WQ MSRNWGQNWQSNSYLNGQ+LSFKVTTSDG TVVS N APAGWS+GQTF+G Q
Sbjct:  114 GGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQ 247          
BLAST of CN191668 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.401e-61
Identity = 104/134 (77.61%), Postives = 119/134 (88.81%), Query Frame = -3
Query:  345 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 746
            GGWCNPP+ HFD+++P F  IAQY+AGIVPVS+RRVPC +KGG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF+VT SDG TV SNNVA  GW FGQTF G Q
Sbjct:  112 GGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQ 245          
BLAST of CN191668 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.401e-61
Identity = 104/134 (77.61%), Postives = 119/134 (88.81%), Query Frame = -3
Query:  345 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 746
            GGWCNPP+ HFD+++P F  IAQY+AGIVPVS+RRVPC +KGG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF+VT SDG TV SNNVA  GW FGQTF G Q
Sbjct:  112 GGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQ 245          
BLAST of CN191668 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.802e-61
Identity = 108/135 (80.00%), Postives = 121/135 (89.63%), Query Frame = -3
Query:  345 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 746
            GGWCNPP QHFDL++P F QIAQY+AGIVPVS+RRVPC +KGGIRFTINGHSYFNLVLI+NVGGAGDV AVSIKGS+T  WQ MSRNWGQNWQSNSY+N QSLSF+VTTSDG T+VSN+VAP+ W FGQT+ G Q
Sbjct:  118 GGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQ 252          
BLAST of CN191668 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 7.577e-61
Identity = 105/134 (78.36%), Postives = 116/134 (86.57%), Query Frame = -3
Query:  345 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 746
            GGWCNPP+ HFD+++P F QI  Y+AGIVPVSYRRVPC +KGGIRFTINGHSYFNLVL+TNV G GDV++VSIKGS T WQPMSRNWGQNWQSNSYL+GQSLSF+V  SDG TV SNNV PAGW FGQTF G Q
Sbjct:  117 GGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQ 250          
BLAST of CN191668 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.205e-60
Identity = 105/134 (78.36%), Postives = 117/134 (87.31%), Query Frame = -3
Query:  345 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 746
            GGWCNPPQ HFDL+QP+F +IAQYKAG+VPV YRRV C RKGGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ T WQ MSRNWGQNWQSN+ L+GQ+LSFKVTTSDG TV+SNN  P  WSFGQT++G Q
Sbjct:  117 GGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQ 250          
BLAST of CN191668 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.024e-57
Identity = 104/134 (77.61%), Postives = 116/134 (86.57%), Query Frame = -3
Query:  345 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 746
            GG C+PP  HFDLSQP++E+IA YK+GI+PV YRRV C R GGIRFTINGHSYFNLVL+TNVGGAGDV +VS+KGSRT WQ MSRNWGQNWQSNSYLNGQSLSF VTTSD  +VVS NVAP  WSFGQT++G Q
Sbjct:  119 GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQ 252          
BLAST of CN191668 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.338e-57
Identity = 101/135 (74.81%), Postives = 117/135 (86.67%), Query Frame = -3
Query:  345 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 746
            GGWCNPP+ HFD+SQPVF++IA +KAGIVPVSYRRV C +KGGIRFTINGHSYFNLVL+TNVGGAGDV AV++K  R+  WQ +SRNWGQNWQS + L+GQ+LSF+VTT DG +VVSNN  P GWSFGQTFSG Q
Sbjct:  155 GGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQTFSGAQ 289          
The following BLAST results are available for this feature:
BLAST of CN191668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
EXPA1_ARATH2.432e-6785.93Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP15_ARATH5.071e-6582.84Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXP10_ARATH6.623e-6584.33Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXPA4_ORYSJ3.401e-6177.61Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI3.401e-6177.61Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA8_ARATH5.802e-6180.00Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA2_ORYSJ7.577e-6178.36Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP14_ARATH2.205e-6078.36Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA5_ARATH1.024e-5777.61Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXPA5_ORYSJ1.338e-5774.81Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005J18_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005J18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191668 ID=CN191668; Name=CN191668; organism=Citrus sinensis; type=EST; length=748bp
TTTTTTTTTTTTTTTTTAAAAAAAAAAATTAAAGACACATCCAGCAAAAG
GCTAATAATATTATAAGCACAGTTGCTCAGTTTATAGATGGCGGGTGGTA
CATGCCCTCCACTGCCAGCCAATTTCTGTCTCTGCCAATTTCAAAATTAG
AGCAAAGCAAAAACCACCGTACTAAAATACATAATCAAAATATAAAACGC
CAAAGGGCCATTTCAAAATAAGCCCTTTGTCATTTTGATACCAGATTCAA
CTAATTAACGCTATTACACTCATTATTTTATACTTGAAAATGTGAAAAAA
AAAAACTGCTGGATTTTGGAGGCTGAGTTTCAACTTCAGGGAACTTGCAG
GCCACTGAAGGTTTGGCCAAAGGACCAGCCAGCTGGGGCAACATTGTTAG
AGACAACAGTGTGGCCATCACTTGTGGTGACCTTAAATGAGAGGCTTTGG
CCATTGAGGTAACTGTTACTTTGCCAGTTTTGACCCCAGTTCCTTGACAT
GGGTTGCCAATCAGTTCTTGACCCTTTGATTGAAACAGCACGCACATCAC
CAGCGCCTCCGACGTTTGTGATTAGGACTAAGTTGAAGTAAGAATGGCCG
TTGATCGTGAATCTGATGCCTCCCTTCCTACTGCATGGAACCCTTCTGTA
AGACACAGGTACTATCCCAGCTTTGTACTGAGCAATTTGTTCAAACACAG
GCTGAGAGAGGTCAAAATGTTGCTGGGGAGGATTGCACCAGCCACCGG
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