CN191630

Overview
NameCN191630
Unique NameCN191630
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length546
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191630 vs. ExPASy Swiss-Prot
Match: TXND5_HUMAN (Thioredoxin domain-containing protein 5 OS=Homo sapiens GN=TXNDC5 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17
Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 1
Query:  127 KSEVITLTPDTFTDKVKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKA-MXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAE 456
            K  V+ LT + F D + E  T  F+KF  PWC HCK L   WE+L K               C A + +CSK  +  YPT  +F  GK+V+++ G RD++SL  FVL +A+
Sbjct:  321 KGTVLALTENNFDDTIAEGIT--FIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQAK 429          

HSP 2 Score: 75.0998 bits (183), Expect = 2.461e-13
Identity = 38/102 (37.25%), Postives = 51/102 (50.00%), Query Frame = 1
Query:  148 TPDTFTDKVKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXX--CGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLE 447
            T D FT  ++    A FV F  PWC HC+ L   W DLG                 C A   +CS   +  YPT K+F  G+E  KYQGPRD ++L+ ++L+
Sbjct:   67 TADMFTHGIQS--AAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQ 166          

HSP 3 Score: 75.0998 bits (183), Expect = 2.461e-13
Identity = 35/93 (37.63%), Postives = 47/93 (50.54%), Query Frame = 1
Query:  196 FVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAATKA 474
            F+KF  PWC HCK L   WE L   +            C     LCS   +  YPT   F DGK+V +Y+G RD+ESL+ +V  + ++  T A
Sbjct:  209 FIKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCTQHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKRDLESLREYVESQLQRTETGA 301          
BLAST of CN191630 vs. ExPASy Swiss-Prot
Match: TXND5_MOUSE (Thioredoxin domain-containing protein 5 OS=Mus musculus GN=Txndc5 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.067e-16
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 1
Query:  127 KSEVITLTPDTFTDKVKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKA-MXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAE 456
            K  V+ LT  +F D + +  T  FVKF  PWC HCKNL   WE+L K               C A + +CSK  +  YPT  +F  G++V ++ G RD++SL +FVL +A+
Sbjct:  306 KGTVLALTEKSFEDTIAQGIT--FVKFYAPWCGHCKNLAPTWEELSKKEFPGLSDVTIAEVDCTAERNVCSKYSVRGYPTLLLFRGGEKVGEHNGGRDLDSLHSFVLRQAK 414          

HSP 2 Score: 75.8702 bits (185), Expect = 1.443e-13
Identity = 39/102 (38.24%), Postives = 50/102 (49.02%), Query Frame = 1
Query:  148 TPDTFTDKVKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXX--CGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLE 447
            T D FT  ++    A FV F  PWC HC+ L   W DLG                 C A   +CS   +  YPT K F  G+E  KYQGPRD E+L+ ++L+
Sbjct:   53 TADMFTHGIQS--AAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTADSDVCSAQGVRGYPTLKFFKPGQEAVKYQGPRDFETLENWMLQ 152          

HSP 3 Score: 72.7886 bits (177), Expect = 1.221e-12
Identity = 32/87 (36.78%), Postives = 45/87 (51.72%), Query Frame = 1
Query:  196 FVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAE 456
            F+KF  PWC HCK L   WE L   +            C     +CS+  +  YPT   F DGK+V +Y+G RD+ESL+ +V  + +
Sbjct:  195 FIKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCTQHYAVCSEHQVRGYPTLLWFRDGKKVDQYKGKRDLESLRDYVQSQLQ 281          
BLAST of CN191630 vs. ExPASy Swiss-Prot
Match: PDIA6_ARATH (Probable protein disulfide-isomerase A6 OS=Arabidopsis thaliana GN=At2g47470 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.198e-13
Identity = 39/107 (36.45%), Postives = 56/107 (52.34%), Query Frame = 1
Query:  133 EVITLTPDTFTDKVKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGK-EVAKYQGPRDVESLKTFVLEE 450
            +V+ LT D+F  +V  KD    V+F  PWC HCK L   +E LG +             C   K++C+K  +  YPT + F  G  E  KY+GPR+ E+L  +V +E
Sbjct:   24 DVVVLTDDSFEKEVG-KDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKE 129          
BLAST of CN191630 vs. ExPASy Swiss-Prot
Match: PDIA3_RAT (Protein disulfide-isomerase A3 OS=Rattus norvegicus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 7.160e-13
Identity = 38/120 (31.67%), Postives = 60/120 (50.00%), Query Frame = 1
Query:  112 AMIHSKSEVITLTPDTFTDKVKEKDTA--WFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAA 465
            A++ S S+V+ LT + F  +V +  +A    V+F  PWC HCK L   +E    A             C A+   C+K  +  YPT K+F DG+E   Y GPR  + + + + ++A  A+
Sbjct:   19 ALLASASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPAS 136          
BLAST of CN191630 vs. ExPASy Swiss-Prot
Match: ERP38_NEUCR (Protein disulfide-isomerase erp38 OS=Neurospora crassa GN=erp38 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 7.160e-13
Identity = 44/128 (34.38%), Postives = 64/128 (50.00%), Query Frame = 1
Query:  112 AMIHSKSEVITLTPDTFTDKVKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKAM-XXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGK--EVAKYQGPRDVESLKTFVLEEAEKAATKAQLGG 486
            A + +KS V+ L P  F D V +      V+F  PWC HCKNL  ++E+L  A+               A + L  +  +  +PT K F+DGK  +   Y+G RD++SL  F+   AEK   KA+  G
Sbjct:   14 AAVAAKSAVLDLIPSNFDDVVLKSGKPTLVEFFAPWCGHCKNLAPVYEELATALEYAKDKVQIAKVDADAERALGKRFGVQGFPTLK-FFDGKSEQPVDYKGGRDLDSLSNFI---AEKTGVKARKKG 137          
BLAST of CN191630 vs. ExPASy Swiss-Prot
Match: PDIA3_CERAE (Protein disulfide-isomerase A3 OS=Cercopithecus aethiops GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12
Identity = 38/120 (31.67%), Postives = 59/120 (49.17%), Query Frame = 1
Query:  112 AMIHSKSEVITLTPDTFTDKVKEKDTA--WFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAA 465
            A + + S+V+ LT D F  +V +  +A    V+F  PWC HCK L   +E    A             C A+   C+K  +  YPT K+F DG+E   Y GPR  + + + + ++A  A+
Sbjct:   19 ARLAAASDVLELTDDNFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPAS 136          
BLAST of CN191630 vs. ExPASy Swiss-Prot
Match: PDIA3_PONAB (Protein disulfide-isomerase A3 OS=Pongo abelii GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12
Identity = 37/120 (30.83%), Postives = 59/120 (49.17%), Query Frame = 1
Query:  112 AMIHSKSEVITLTPDTFTDKVKEKDTA--WFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAA 465
            A + + S+V+ LT D F  ++ +  +A    V+F  PWC HCK L   +E    A             C A+   C+K  +  YPT K+F DG+E   Y GPR  + + + + ++A  A+
Sbjct:   19 ARLAAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPAS 136          
BLAST of CN191630 vs. ExPASy Swiss-Prot
Match: PDIA3_HUMAN (Protein disulfide-isomerase A3 OS=Homo sapiens GN=PDIA3 PE=1 SV=4)

HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12
Identity = 37/120 (30.83%), Postives = 59/120 (49.17%), Query Frame = 1
Query:  112 AMIHSKSEVITLTPDTFTDKVKEKDTA--WFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAA 465
            A + + S+V+ LT D F  ++ +  +A    V+F  PWC HCK L   +E    A             C A+   C+K  +  YPT K+F DG+E   Y GPR  + + + + ++A  A+
Sbjct:   19 ARLAAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPAS 136          
BLAST of CN191630 vs. ExPASy Swiss-Prot
Match: PDIA3_MOUSE (Protein disulfide-isomerase A3 OS=Mus musculus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.554e-12
Identity = 37/120 (30.83%), Postives = 59/120 (49.17%), Query Frame = 1
Query:  112 AMIHSKSEVITLTPDTFTDKVKEKDTA--WFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAA 465
            A + + S+V+ LT + F  +V +  +A    V+F  PWC HCK L   +E    A             C A+   C+K  +  YPT K+F DG+E   Y GPR  + + + + ++A  A+
Sbjct:   19 ARLAAASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPAS 136          
BLAST of CN191630 vs. ExPASy Swiss-Prot
Match: PDIA3_BOVIN (Protein disulfide-isomerase A3 OS=Bos taurus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.917e-12
Identity = 36/120 (30.00%), Postives = 59/120 (49.17%), Query Frame = 1
Query:  112 AMIHSKSEVITLTPDTFTDKVKEKDTA--WFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAA 465
            A + + S+V+ LT D F  ++ +  ++    V+F  PWC HCK L   +E    A             C A+   C+K  +  YPT K+F DG+E   Y GPR  + + + + ++A  A+
Sbjct:   19 ARLAAASDVLELTDDNFESRITDTGSSGLMLVEFFAPWCGHCKKLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEESGAYDGPRTADGIVSHLKKQAGPAS 136          
The following BLAST results are available for this feature:
BLAST of CN191630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
TXND5_HUMAN8.174e-1738.74Thioredoxin domain-containing protein 5 OS=Homo sa... [more]
TXND5_MOUSE1.067e-1638.74Thioredoxin domain-containing protein 5 OS=Mus mus... [more]
PDIA6_ARATH4.198e-1336.45Probable protein disulfide-isomerase A6 OS=Arabido... [more]
PDIA3_RAT7.160e-1331.67Protein disulfide-isomerase A3 OS=Rattus norvegicu... [more]
ERP38_NEUCR7.160e-1334.38Protein disulfide-isomerase erp38 OS=Neurospora cr... [more]
PDIA3_CERAE1.221e-1231.67Protein disulfide-isomerase A3 OS=Cercopithecus ae... [more]
PDIA3_PONAB1.595e-1230.83Protein disulfide-isomerase A3 OS=Pongo abelii GN=... [more]
PDIA3_HUMAN1.595e-1230.83Protein disulfide-isomerase A3 OS=Homo sapiens GN=... [more]
PDIA3_MOUSE3.554e-1230.83Protein disulfide-isomerase A3 OS=Mus musculus GN=... [more]
PDIA3_BOVIN7.917e-1230.00Protein disulfide-isomerase A3 OS=Bos taurus GN=PD... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005I16_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005I16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191630 ID=CN191630; Name=CN191630; organism=Citrus sinensis; type=EST; length=546bp
GAGGGTCAAGCGCGAGAAGTCTCAGAGCCATCATAAGCTATGAGAAACCA
CAGCAACTCGTCCTTTGCTCTCAATCTGACATCACTTGTTCTTCTTCTTT
CGCTTAGCCTGGCAATGATTCATTCAAAGTCCGAAGTCATAACGTTAACT
CCCGACACATTCACTGACAAGGTGAAGGAAAAAGACACCGCATGGTTTGT
GAAATTTTGTGTGCCTTGGTGTAAGCATTGTAAGAACTTGGGGTCGTTAT
GGGAGGATCTGGGAAAGGCAATGGAAGGGGATGATGAAATAGAGGTCGGA
GAAGTTGACTGCGGTGCAAGCAAGACTTTATGCTCTAAAGTTGATATCCA
TTCCTATCCTACATTTAAGGTCTTTTACGATGGAAAAGAAGTTGCAAAAT
ATCAAGGGCCAAGGGATGTTGAATCGCTTAAAACATTTGTTTTGGAAGAG
GCAGAAAAAGCAGCAACAAAAGCACAGCTTGGTGGTGACAAGGAATTGTG
ACAAGTTGTGGTACTTGCCAGCAAAACCAGAATGGCCAATTCCCAT
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