CN191628

Overview
NameCN191628
Unique NameCN191628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191628 vs. ExPASy Swiss-Prot
Match: STP14_ARATH (Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.154e-46
Identity = 83/111 (74.77%), Postives = 98/111 (88.29%), Query Frame = -2
Query:  341 VIVICLFVLAYGRSWGPLGWLVPSELFPLEMRSAGQSVVVCNNLLFTALIAQAFLAALCHLKFGIFLVFGGLVVIMSAFIYFFLPETKQVPIEEIYLLFENHWFWKRIVKE 673
            V++ICLFVLAYGRSWGP+GWLVPSELFPLE RSAGQSVVVC NL FTALIAQ FL +LCHLK+GIFL+F GL++ M +F+YF LPETKQVPIEE+YLL+  HW WK+ V++
Sbjct:  391 VVLICLFVLAYGRSWGPMGWLVPSELFPLETRSAGQSVVVCVNLFFTALIAQCFLVSLCHLKYGIFLLFAGLILGMGSFVYFLLPETKQVPIEEVYLLWRQHWLWKKYVED 501          
BLAST of CN191628 vs. ExPASy Swiss-Prot
Match: STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.044e-39
Identity = 73/111 (65.77%), Postives = 88/111 (79.28%), Query Frame = -2
Query:  341 VIVICLFVLAYGRSWGPLGWLVPSELFPLEMRSAGQSVVVCNNLLFTALIAQAFLAALCHLKFGIFLVFGGLVVIMSAFIYFFLPETKQVPIEEIYLLFENHWFWKRIVKE 673
            VI ICLFV+A+G SWGPLGW +PSE+FPLE RSAGQS+ V  NLLFT +IAQAFL  LC  KFGIFL F G V +M+ F+YF LPETK VPIEE+ LL+  HWFWK+++ +
Sbjct:  390 VIFICLFVVAFGWSWGPLGWTIPSEIFPLETRSAGQSITVAVNLLFTFIIAQAFLGLLCAFKFGIFLFFAGWVTVMTIFVYFLLPETKGVPIEEMTLLWSKHWFWKKVLPD 500          
BLAST of CN191628 vs. ExPASy Swiss-Prot
Match: STA_RICCO (Sugar carrier protein A OS=Ricinus communis GN=STA PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.781e-39
Identity = 74/109 (67.89%), Postives = 87/109 (79.82%), Query Frame = -2
Query:  347 VIVICLFVLAYGRSWGPLGWLVPSELFPLEMRSAGQSVVVCNNLLFTALIAQAFLAALCHLKFGIFLVFGGLVVIMSAFIYFFLPETKQVPIEEIYLLFENHWFWKRIV 673
            VI+ICLFVLA+G SWGPLGW VPSE+FPLE RSAGQS+ V  NL FT +IAQ+F + LC  KFGIFL F G V +M+AF+Y FLPETK VPIEE+  L+  HWFWK+IV
Sbjct:  390 VIMICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQSFPSLLCAFKFGIFLFFAGWVTVMTAFVYIFLPETKGVPIEEMIFLWRKHWFWKKIV 498          
BLAST of CN191628 vs. ExPASy Swiss-Prot
Match: HEX6_RICCO (Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.157e-38
Identity = 68/112 (60.71%), Postives = 94/112 (83.93%), Query Frame = -2
Query:  338 VIVICLFVLAYGRSWGPLGWLVPSELFPLEMRSAGQSVVVCNNLLFTALIAQAFLAALCHLKFGIFLVFGGLVVIMSAFIYFFLPETKQVPIEEIYLLFENHWFWKRIVKED 673
            +I+IC++V  +G SWGPLGWLVPSE+FPLE+RSAGQS+VV  + LFT ++AQ FL+ LCH K GIF  FGG VV+M+AF++F LPETK+VPIE++ +++ +HWFWK+I+ E+
Sbjct:  388 LILICIYVAGFGWSWGPLGWLVPSEIFPLEIRSAGQSIVVAVSFLFTFVVAQTFLSMLCHFKSGIFFFFGGWVVVMTAFVHFLLPETKKVPIEKMDIVWRDHWFWKKIIGEE 499          
BLAST of CN191628 vs. ExPASy Swiss-Prot
Match: STP13_ARATH (Sugar transport protein 13 OS=Arabidopsis thaliana GN=STP13 PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 8.290e-37
Identity = 74/125 (59.20%), Postives = 92/125 (73.60%), Query Frame = -2
Query:  305 VIVICLFVLAYGRSWGPLGWLVPSELFPLEMRSAGQSVVVCNNLLFTALIAQAFLAALCHLKFGIFLVFGGLVVIMSAFIYFFLPETKQVPIEEI-YLLFENHWFWKRIVKEDNG-KFVEPVK*N 673
            V++IC +V A+  SWGPLGWL+PSE FPLE RSAGQSV VC NLLFT +IAQAFL+ LCH KFGIF+ F   V+IMS F+ F LPETK +PIEE+   +++ HWFW R + + N  +FV   K N
Sbjct:  390 VVMICTYVAAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFIIAQAFLSMLCHFKFGIFIFFSAWVLIMSVFVMFLLPETKNIPIEEMTERVWKKHWFWARFMDDHNDHEFVNGEKSN 514          
BLAST of CN191628 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.150e-36
Identity = 66/111 (59.46%), Postives = 86/111 (77.48%), Query Frame = -2
Query:  341 VIVICLFVLAYGRSWGPLGWLVPSELFPLEMRSAGQSVVVCNNLLFTALIAQAFLAALCHLKFGIFLVFGGLVVIMSAFIYFFLPETKQVPIEEIYLLFENHWFWKRIVKE 673
            V  IC++V  +  SWGPLGWLVPSE+FPLE+RSA QS+ V  N++FT +IAQ FL  LCHLKFG+FLVF   VV+MS F+Y FLPETK +PIEE+  ++ +HW+W R V++
Sbjct:  391 VTFICIYVAGFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFIIAQIFLTMLCHLKFGLFLVFAFFVVVMSIFVYIFLPETKGIPIEEMGQVWRSHWYWSRFVED 501          
BLAST of CN191628 vs. ExPASy Swiss-Prot
Match: STP12_ARATH (Sugar transport protein 12 OS=Arabidopsis thaliana GN=STP12 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.197e-35
Identity = 65/109 (59.63%), Postives = 85/109 (77.98%), Query Frame = -2
Query:  347 VIVICLFVLAYGRSWGPLGWLVPSELFPLEMRSAGQSVVVCNNLLFTALIAQAFLAALCHLKFGIFLVFGGLVVIMSAFIYFFLPETKQVPIEEIYLLFENHWFWKRIV 673
            V+ IC++V A+  SWGPLGWLVPSE+FPLE+RSA QS+ V  N++FT LIAQ FL  LCHLKFG+F+ F   VV+MS F+Y FLPET+ VPIEE+  ++ +HW+W + V
Sbjct:  389 VLFICIYVAAFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFLIAQVFLMMLCHLKFGLFIFFAFFVVVMSIFVYLFLPETRGVPIEEMNRVWRSHWYWSKFV 497          
BLAST of CN191628 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.941e-35
Identity = 64/113 (56.64%), Postives = 87/113 (76.99%), Query Frame = -2
Query:  335 VIVICLFVLAYGRSWGPLGWLVPSELFPLEMRSAGQSVVVCNNLLFTALIAQAFLAALCHLKFGIFLVFGGLVVIMSAFIYFFLPETKQVPIEEIYLLFENHWFWKRIVKEDN 673
            V+ IC++V  +  SWGPLGWLVPSE+FPLE+RSA QSV V  N+ FT ++AQ FL  LCHLKFG+F+ F   V+IMS F+Y+FLPETK +PIEE+  +++ HW+W R V +++
Sbjct:  393 VLFICIYVSGFAWSWGPLGWLVPSEIFPLEIRSAAQSVNVSVNMFFTFVVAQVFLIMLCHLKFGLFIFFSFFVLIMSIFVYYFLPETKGIPIEEMGQVWKQHWYWSRYVVDED 505          
BLAST of CN191628 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.578e-34
Identity = 63/109 (57.80%), Postives = 81/109 (74.31%), Query Frame = -2
Query:  338 ICLFVLAYGRSWGPLGWLVPSELFPLEMRSAGQSVVVCNNLLFTALIAQAFLAALCHLKFGIFLVFGGLVVIMSAFIYFFLPETKQVPIEEIYLLFENHWFWKRIVKED 664
            IC++V  +  SWGPLGWLVPSE+ PLE+R AGQ++ V  N+ FT LI Q FL  LCH+KFG+F  F  +V IM+ FIYF LPETK VPIEE+  +++ HWFWK+ + ED
Sbjct:  394 ICVYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKFGLFYFFASMVAIMTVFIYFLLPETKGVPIEEMGRVWKQHWFWKKYIPED 502          
BLAST of CN191628 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.911e-33
Identity = 64/109 (58.72%), Postives = 82/109 (75.23%), Query Frame = -2
Query:  338 ICLFVLAYGRSWGPLGWLVPSELFPLEMRSAGQSVVVCNNLLFTALIAQAFLAALCHLKFGIFLVFGGLVVIMSAFIYFFLPETKQVPIEEIYLLFENHWFWKRIVKED 664
            ICL+V  +  SWGPLGWLVPSE+ PLE+R AGQ++ V  N+ FT LI Q FL  LCH+KFG+F  FGG+V +M+ FIYF LPETK VPIEE+  +++ H FWKR + +D
Sbjct:  395 ICLYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKFGLFYFFGGMVAVMTVFIYFLLPETKGVPIEEMGRVWKQHPFWKRYMPDD 503          
The following BLAST results are available for this feature:
BLAST of CN191628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
STP14_ARATH1.154e-4674.77Sugar transport protein 14 OS=Arabidopsis thaliana... [more]
STP7_ARATH3.044e-3965.77Sugar transport protein 7 OS=Arabidopsis thaliana ... [more]
STA_RICCO6.781e-3967.89Sugar carrier protein A OS=Ricinus communis GN=STA... [more]
HEX6_RICCO1.157e-3860.71Hexose carrier protein HEX6 OS=Ricinus communis GN... [more]
STP13_ARATH8.290e-3759.20Sugar transport protein 13 OS=Arabidopsis thaliana... [more]
STP1_ARATH3.150e-3659.46Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
STP12_ARATH1.197e-3559.63Sugar transport protein 12 OS=Arabidopsis thaliana... [more]
STC_RICCO5.941e-3556.64Sugar carrier protein C OS=Ricinus communis GN=STC... [more]
STP10_ARATH8.578e-3457.80Sugar transport protein 10 OS=Arabidopsis thaliana... [more]
STP9_ARATH1.911e-3358.72Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0005I15_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005I15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191628 ID=CN191628; Name=CN191628; organism=Citrus sinensis; type=EST; length=674bp
TTTCTTTGAAAACTACTGAATGTTGCATTACTCTTAATTACATGACTGAA
CTAATTGCTATTCAAACTGGGAATAGTGGATGATAAATAAATAAATAAAT
ATGAAGAATCTTTTATTTTTATTTCTTGCAGTATATTCACGGACTCTACC
AGGACATTCTACTCATTTGAGTGAATAATATAAGCTAAATGAAATTTATA
AATTTGTAGTTAAAAACAAAGATGGGAAAAGAAAGAAATCTTGATTGTAC
ATTATTGATAGTGTTTTTCATGGATCATTTAGGTCAAGAGCTGAAAACTT
GCAGGTTTCACTTAACTGGTTCAACAAACTTGCCATTATCTTCCTTGACT
ATCCTCTTCCAGAACCAGTGATTTTCAAAGAGAAGATAAATTTCTTCAAT
TGGAACTTGCTTTGTTTCTGGCAAAAAGAAGTAAATGAAGGCGCTCATGA
TGACAACCAAGCCACCAAAGACCAAGAAAATTCCGAATTTGAGATGACAG
AGCGCGGCGAGGAAAGCCTGTGCTATTAAAGCTGTGAACAAGAGGTTGTT
ACAGACCACCACACTCTGCCCAGCTGACCTCATTTCCAAGGGGAAGAGCT
CACTTGGAACTAACCAACCTAGAGGCCCCCATGACCTTCCGTAAGCCAAC
ACAAATAAACAGATGACAATTACA
back to top