CN191423

Overview
NameCN191423
Unique NameCN191423
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN191423 vs. ExPASy Swiss-Prot
Match: Y4920_ARATH (Uncharacterized protein At4g37920, chloroplastic OS=Arabidopsis thaliana GN=At4g37920 PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.007e-52
Identity = 96/142 (67.61%), Postives = 119/142 (83.80%), Query Frame = 1 
Query:  238 TANAEME---EDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLASKVKKIDDEMESHYDLLKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSL 654
            T +AE++   ED  E EVAEGYT+ QFCDKIID+FLNEKP+VKQW+ YLV R++WNKY  +FY RCR RAD E++P +K+KL+SL SKVKKID EME H DLLKEIQ++PTDINA+ A+RR+DFTGEFFRY++L+SET D L
Sbjct:   60 TTSAEVKSSVEDPMEVEVAEGYTMAQFCDKIIDLFLNEKPKVKQWKTYLVLRDEWNKYSVNFYKRCRIRADTETDPILKQKLVSLESKVKKIDKEMEKHNDLLKEIQENPTDINAIAAKRRRDFTGEFFRYVTLLSETLDGL 201
The following BLAST results are available for this feature:
BLAST of CN191423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4920_ARATH3.007e-5267.61Uncharacterized protein At4g37920, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005C17_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191423 ID=CN191423; Name=CN191423; organism=Citrus sinensis; type=EST; length=655bp
GAGGTCCTCTGTTTGCTTCCAATCCGAAGCAGAACCATGAGTAATCTCTT
AAGCTTCGAGCTAGCAATTTCTACACCCAAATCCGCTCTTGAAAAATCAA
CTTTAACATCGGTCAAAACTCCTCTCATATCCATTTCCTCTACTAAGCAG
CTCAAAATAACAGAAGCCAGTCACAGTTTCAAAACAAACACCCTGAGCTC
TAGCAACAGAACCAGTAGGCAAGTGTGTGGAGTAGTCACAGCTAACGCTG
AGATGGAAGAGGACCAATCGGAGAAGGAAGTTGCTGAGGGCTACACTTTA
ACTCAATTTTGCGACAAGATTATTGATGTGTTCTTGAATGAGAAGCCTAG
AGTTAAACAATGGAGAAAGTATTTGGTTTTTAGGGAGGATTGGAATAAGT
ATCGGGAAAGCTTCTATAATCGGTGTCGAACACGAGCGGATGAGGAGAGT
GAACCTACTATGAAGGAGAAATTAATTTCACTGGCTAGCAAAGTGAAGAA
GATTGATGATGAAATGGAAAGCCACTATGACCTTCTTAAGGAGATACAAG
ACAGCCCAACTGATATAAATGCAGTAGTTGCAAGGCGACGCAAAGACTTC
ACTGGGGAGTTTTTCCGCTACCTCTCTCTCGTTTCAGAAACACATGACAG
TCTGG
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