CN191413

Overview
NameCN191413
Unique NameCN191413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191413 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 6.748e-50
Identity = 97/107 (90.65%), Postives = 104/107 (97.20%), Query Frame = -3
Query:  259 KFGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDEA 579
            K GDERK AAE+TM++YKAAQD+A+ DLAPTHPIRLGLALNFSVFYYEILNSSEKAC+MAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQ+DEA
Sbjct:  142 KSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDEA 248          
BLAST of CN191413 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.564e-49
Identity = 97/107 (90.65%), Postives = 102/107 (95.33%), Query Frame = -3
Query:  259 KFGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDEA 579
            K GDERK AAE+TML+YKAAQDIA  D+APTHPIRLGLALNFSVFYYEILNSS+KAC MAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQ+DEA
Sbjct:  142 KSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDEA 248          
BLAST of CN191413 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.461e-49
Identity = 96/107 (89.72%), Postives = 104/107 (97.20%), Query Frame = -3
Query:  259 KFGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDEA 579
            K G+ERK AAE+TML+YKAAQDIAL +LAPTHPIRLGLALN+SVFYYEILN+SEKAC+MAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQ+DEA
Sbjct:  143 KVGNERKEAAEDTMLAYKAAQDIALAELAPTHPIRLGLALNYSVFYYEILNASEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDEA 249          
BLAST of CN191413 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.273e-48
Identity = 95/107 (88.79%), Postives = 104/107 (97.20%), Query Frame = -3
Query:  259 KFGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDEA 579
            K G+ERK AAE+TML+YKAAQDIA+ +LAPTHPIRLGLALNFSVFYYEILN+SEKAC+MAKQAFEEAIAELDT+GEESYKDSTLIMQLLRDNLTLWTSDMQEQ+DEA
Sbjct:  143 KVGNERKEAAEDTMLAYKAAQDIAVAELAPTHPIRLGLALNFSVFYYEILNASEKACSMAKQAFEEAIAELDTMGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDEA 249          
BLAST of CN191413 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.077e-47
Identity = 94/107 (87.85%), Postives = 102/107 (95.33%), Query Frame = -3
Query:  259 KFGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDEA 579
            K GDERK AAE+TM SYKAAQ+IALTDL PTHPIRLGLALNFSVFY+EILNSS+KAC+MAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD Q+Q+DE+
Sbjct:  146 KIGDERKQAAEDTMNSYKAAQEIALTDLPPTHPIRLGLALNFSVFYFEILNSSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDES 252          
BLAST of CN191413 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.135e-47
Identity = 93/106 (87.74%), Postives = 98/106 (92.45%), Query Frame = -3
Query:  262 KFGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDE 579
            K GDERK A E+TMLSYKAAQDIA  DL PTHPIRLGLALNFSVFYYEILN S+KAC MAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD+Q+Q+DE
Sbjct:  141 KVGDERKTATEDTMLSYKAAQDIASADLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDE 246          
BLAST of CN191413 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.439e-44
Identity = 87/106 (82.08%), Postives = 96/106 (90.57%), Query Frame = -3
Query:  262 KFGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDE 579
            K GDERK AAENT+ +YKAAQDIA  +LAPTHPIRLGLALNFSVFYYEILNS ++AC +AKQAF+EAIAELDTLGE+SYKDSTLIMQLLRDNLTLWTSDMQ+   E
Sbjct:  143 KTGDERKLAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDDTAE 248          
BLAST of CN191413 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.233e-43
Identity = 87/102 (85.29%), Postives = 95/102 (93.14%), Query Frame = -3
Query:  274 KFGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 579
            K G ERK AAE+TM++YKAAQDIAL DLAPTHPIRLGLALNFSVFYYEILNS +KAC +AKQAF+EAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ E
Sbjct:  137 KTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTE 238          
BLAST of CN191413 vs. ExPASy Swiss-Prot
Match: 1433C_TOBAC (14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.746e-43
Identity = 86/102 (84.31%), Postives = 95/102 (93.14%), Query Frame = -3
Query:  274 KFGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 579
            K G ERK AAE+T+ +YKAAQDIA T+LAPTHPIRLGLALNFSVFYYEILNS ++AC +AKQAF+EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ+
Sbjct:  142 KTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 243          
BLAST of CN191413 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 2.746e-43
Identity = 84/103 (81.55%), Postives = 98/103 (95.15%), Query Frame = -3
Query:  271 KFGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQ 579
            K G ERK AAE+T+++YK+AQDIAL DLAPTHPIRLGLALNFSVFYYEILNSS++AC++AKQAF+EAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ ++
Sbjct:  141 KTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSSDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLNDE 243          
The following BLAST results are available for this feature:
BLAST of CN191413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14338_ARATH6.748e-5090.6514-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14336_ARATH2.564e-4990.6514-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
1433D_TOBAC7.461e-4989.7214-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
14331_SOLLC1.273e-4888.7914-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
14310_SOLLC1.077e-4787.8514-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
1433B_SOYBN3.135e-4787.7414-3-3-like protein B (Fragment) OS=Glycine max GN... [more]
1433_HELAN9.439e-4482.0814-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]
14333_ORYSJ1.233e-4385.2914-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
1433C_TOBAC2.746e-4384.3114-3-3-like protein C OS=Nicotiana tabacum PE=1 SV... [more]
14335_ARATH2.746e-4381.5514-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0005C10_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191413 ID=CN191413; Name=CN191413; organism=Citrus sinensis; type=EST; length=596bp
GAGGTCTATATCCACTGGCTAATAAAATTGCTGCAGGCTGAAGAATTTCA
AAGCCATATAGAAGCTACATACTTAGCACATCATATACTGACCTACTCGT
CCCACTTGCATAAAGTTTGTCAGATATTGTAACGAAATCCAAAAGGAAGA
CAACACAAGTTTACAACCGATACATAGTCAACTAAAATCACACTTGCTTT
ACAATTCATGACATTCAAAAGCCCACCTCCCCAGAGGAGCAAACGATCCA
TACCCTTATGCCTCATCTATCTGCTCCTGCATATCTGAGGTCCACAGAGT
GAGGTTGTCTCTTAGCAATTGCATGATAAGAGTGCTATCCTTGTAGGATT
CTTCACCCAAAGTGTCCAGCTCAGCAATGGCCTCCTCAAAGGCCTGTTTG
GCCATGGTACAAGCTTTCTCTGATGAATTGAGAATCTCATAGTAAAACAC
TGAGAAGTTGAGTGCCAGCCCCAACCTTATAGGGTGTGTTGGCGCCAGAT
CAGTCAGTGCAATATCCTGAGCCGCCTTATAAGACAACATAGTGTTTTCA
GCGGCGGCCTTCCTCTCATCACCAAACTTTAAACTCCCGCCAAGTA
back to top