GR312992

Overview
NameGR312992
Unique NameGR312992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13533 contig Csv1_Contig13533:554..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.891e-36
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPP+RHSIVVNLGDQ+EVITNGK
Sbjct:  157 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.891e-36
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPP+RHSIVVNLGDQ+EVITNGK
Sbjct:  157 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.132e-35
Identity = 69/72 (95.83%), Postives = 72/72 (100.00%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG+WIDVPP+RHSIVVNLGDQ+EVITNGK
Sbjct:  157 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.294e-35
Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIVVNLGDQ+EVITNGK
Sbjct:  157 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.294e-35
Identity = 68/72 (94.44%), Postives = 71/72 (98.61%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIV+NLGDQ+EVITNGK
Sbjct:  157 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 3.294e-35
Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIVVNLGDQ+EVITNGK
Sbjct:  157 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.303e-35
Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG W+DVPP++HSIVVNLGDQ+EVITNGK
Sbjct:  163 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGK 234          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.619e-35
Identity = 67/72 (93.06%), Postives = 72/72 (100.00%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG+WIDVPP+RHSIVVN+GDQ+EVITNGK
Sbjct:  161 TKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGK 232          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.339e-35
Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG+W+DVPP+ HSIV+NLGDQIEVITNGK
Sbjct:  157 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.339e-35
Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG WIDVPP+RH+IVVNLGDQ+EVITNG+
Sbjct:  157 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGR 228          
The following BLAST results are available for this feature:
BLAST of GR312992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ACCO3_PETHY3.891e-3697.221-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_PETHY3.891e-3697.221-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO2_SOLLC1.132e-3595.831-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO4_SOLLC3.294e-3595.831-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO4_PETHY3.294e-3594.441-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_SOLLC3.294e-3595.831-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_DIACA4.303e-3593.06Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO1_DORSP5.619e-3593.061-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO2_MALDO7.339e-3593.061-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_CUCME7.339e-3593.061-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]

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Properties
Property NameValue
Genbank descriptionC06057B07 RindPdigS Citrus sinensis cDNA clone N14A04, mRNA sequence.