GR312965

Overview
NameGR312965
Unique NameGR312965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1574 contig Csv1_Contig1574:902..1109. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GR312965 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.693e-32
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 3
Query:    3 RELAHRVDEALGFMSAAGLTVDHPITTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGE 206
            RELA+RVDEALGFM+AAGLTVDHPI  TTEFWTSHECLLLPYEQSLTRLDSTSG YYDCSAHF+WVGE
Sbjct:  285 RELANRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFIWVGE 352          
BLAST of GR312965 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.923e-31
Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 3
Query:    3 RELAHRVDEALGFMSAAGLTVDHPITTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGE 206
            RELAHRVDEALGFM+AAGLTVDHPI TTT+FWTSHECLLLPYEQSLTR DSTSG +YDCSAH LWVGE
Sbjct:  275 RELAHRVDEALGFMTAAGLTVDHPIMTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAHMLWVGE 342          
BLAST of GR312965 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 8.506e-31
Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = 3
Query:    3 RELAHRVDEALGFMSAAGLTVDHPITTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGE 206
            RELA RVDEALGFM+AAGLT+DHPI  TTEFWTSHECLLLPYEQSLTR DSTSG YYDCSAHFLWVGE
Sbjct:  284 RELASRVDEALGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGE 351          
BLAST of GR312965 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 1.451e-30
Identity = 59/68 (86.76%), Postives = 64/68 (94.12%), Query Frame = 3
Query:    3 RELAHRVDEALGFMSAAGLTVDHPITTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGE 206
            RELAHRVDEALGFMSAAGLTVDHP+ T+T+FWTSHECLLLPYEQSLTR DST+G +YDCSAH LWVGE
Sbjct:  290 RELAHRVDEALGFMSAAGLTVDHPLMTSTDFWTSHECLLLPYEQSLTRQDSTTGHFYDCSAHMLWVGE 357          
BLAST of GR312965 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.232e-30
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 3
Query:    3 RELAHRVDEALGFMSAAGLTVDHPITTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGE 206
            RELA RVDEALGFM+AAGLT+DHPI  TTEFWTSHECLLLPYEQSLTR DSTSG +YDCSAHFLWVGE
Sbjct:  284 RELASRVDEALGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLHYDCSAHFLWVGE 351          
BLAST of GR312965 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.228e-29
Identity = 57/68 (83.82%), Postives = 64/68 (94.12%), Query Frame = 3
Query:    3 RELAHRVDEALGFMSAAGLTVDHPITTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGE 206
            +ELAHRVDEALGFM+AAGLTVDHPI +TT+FWTSHECLLLPYEQ+LTR DSTSG +YDCSAH +WVGE
Sbjct:  257 QELAHRVDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGE 324          
BLAST of GR312965 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.228e-29
Identity = 57/68 (83.82%), Postives = 64/68 (94.12%), Query Frame = 3
Query:    3 RELAHRVDEALGFMSAAGLTVDHPITTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGE 206
            +ELAHRVDEALGFM+AAGLTVDHPI +TT+FWTSHECLLLPYEQ+LTR DSTSG +YDCSAH +WVGE
Sbjct:  257 QELAHRVDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGE 324          
BLAST of GR312965 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.228e-29
Identity = 58/68 (85.29%), Postives = 61/68 (89.71%), Query Frame = 3
Query:    3 RELAHRVDEALGFMSAAGLTVDHPITTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGE 206
            +ELAHRVDEALGFM A GLTVDHPI  TTEFWTSHECLLLPYEQ+LTR DSTSG +YDCSAH LWVGE
Sbjct:  248 QELAHRVDEALGFMDACGLTVDHPIMATTEFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMLWVGE 315          
BLAST of GR312965 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 3.574e-29
Identity = 59/68 (86.76%), Postives = 61/68 (89.71%), Query Frame = 3
Query:    3 RELAHRVDEALGFMSAAGLTVDHPITTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGE 206
            RELA+RVDEALGFM AAGLT  HPI TTTEFWTSHECLLLPYEQ+LTR DSTSG YYDCSAH LWVGE
Sbjct:  247 RELANRVDEALGFMGAAGLTSAHPIMTTTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMLWVGE 314          
BLAST of GR312965 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.150e-27
Identity = 55/68 (80.88%), Postives = 61/68 (89.71%), Query Frame = 3
Query:    3 RELAHRVDEALGFMSAAGLTVDHPITTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGE 206
            +ELA+RVDEALGFMSA GL  DHP+ TTT+F+TSHECLLLPYEQSLTRLDSTSG YYDCSAH +W GE
Sbjct:  270 QELANRVDEALGFMSACGLGTDHPLMTTTDFYTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMVWCGE 337          
The following BLAST results are available for this feature:
BLAST of GR312965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
AROF_TOBAC7.693e-3291.18Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ORYSJ2.923e-3189.71Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLTU8.506e-3189.71Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ORYSJ1.451e-3086.76Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC3.232e-3088.24Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_SOLTU1.228e-2983.82Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLLC1.228e-2983.82Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_CATRO1.228e-2985.29Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]
AROG_ARATH3.574e-2986.76Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ARATH1.150e-2780.88Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]

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Properties
Property NameValue
Genbank descriptionC06054E09 RindPdigS Citrus sinensis cDNA clone N09H07, mRNA sequence.