GR312954

Overview
NameGR312954
Unique NameGR312954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GR312954 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.217e-46
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 1
Query:  358 TVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNAGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 618
            TVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMN GPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL
Sbjct:  424 TVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510          
BLAST of GR312954 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.772e-44
Identity = 92/103 (89.32%), Postives = 95/103 (92.23%), Query Frame = -3
Query:    1 YQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKR 309
            YQRR AYGNYSNAA Q+P+   A  DLSMVPSTASAICVQAPAEKGF+ FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKR
Sbjct:   39 YQRRAAYGNYSNAALQHPV--RAFGDLSMVPSTASAICVQAPAEKGFSSFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKR 139          
BLAST of GR312954 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.776e-36
Identity = 76/103 (73.79%), Postives = 86/103 (83.50%), Query Frame = -3
Query:    1 YQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKR 309
            YQ+  AYGNYSNAAFQYP+V+A     S + +T S + VQAP EKGF  FAIDF+MGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRL+EPYKGI DCF R
Sbjct:   40 YQKHAAYGNYSNAAFQYPLVAA-----SQIATTTSPVFVQAPGEKGFTNFAIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLTEPYKGIRDCFGR 137          
BLAST of GR312954 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 6.749e-36
Identity = 77/103 (74.76%), Postives = 83/103 (80.58%), Query Frame = -3
Query:    1 YQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKR 309
            YQR   YGNYSNAAFQ+P  S       M+ +TAS + VQ P EKGF  FA+DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLSEPYKGIGDCF R
Sbjct:   37 YQRHATYGNYSNAAFQFPPTSR------MLATTASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGR 133          
BLAST of GR312954 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.151e-35
Identity = 78/103 (75.73%), Postives = 84/103 (81.55%), Query Frame = -3
Query:    1 YQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKR 309
            YQR  AYGNYSNA  Q      AT DLS++ S AS + VQAP EKGFA FA DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRLSEPYKGIG+CF R
Sbjct:   40 YQRHFAYGNYSNAGLQR---GQATQDLSLITSNASPVFVQAPQEKGFAAFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLSEPYKGIGECFGR 139          
BLAST of GR312954 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.461e-35
Identity = 77/102 (75.49%), Postives = 82/102 (80.39%), Query Frame = -3
Query:    1 QRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKR 306
            QRR  YGNYSNA  Q      AT DLS++ + AS + VQAP EKG A FA DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLSEPYKGIGDCF R
Sbjct:   40 QRRFPYGNYSNAGLQ---TCQATQDLSLIAANASPVFVQAPQEKGLAAFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFSR 138          
BLAST of GR312954 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28
Identity = 68/103 (66.02%), Postives = 75/103 (72.82%), Query Frame = -3
Query:    1 YQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKR 309
            Y+RR A  NY   +   P +S +      VP   + +C  APAEKG   F IDF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGI DCFKR
Sbjct:   40 YERRFATRNYMTQSLWGPSMSVSGG--INVPVMQTPLCANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIVDCFKR 140          
BLAST of GR312954 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.507e-27
Identity = 55/87 (63.22%), Postives = 71/87 (81.61%), Query Frame = 1
Query:  358 TVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNAGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 618
            TV++KT LDSLI+P GW+EW G+FAL TL+YAE+ N GPG+ST+ RV W G+ VL S S+ S+FTVG F+AG SW+P ++VPFTSGL
Sbjct:  426 TVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIP-SSVPFTSGL 511          
BLAST of GR312954 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 4.384e-27
Identity = 67/103 (65.05%), Postives = 74/103 (71.84%), Query Frame = -3
Query:    1 YQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKR 309
            Y+RR A  NY   +   P +S +      VP   + +   APAEKG   F IDF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGI DCFKR
Sbjct:   40 YERRFATRNYMTQSLWGPSMSVSGG--INVPVMPTPLFANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIADCFKR 140          
BLAST of GR312954 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.410e-25
Identity = 47/87 (54.02%), Postives = 65/87 (74.71%), Query Frame = 1
Query:  358 TVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNAGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 618
            TV+++ ++   INP GW+EW+G+FAL+TLYY EYMN+GPG+S   RVKW GYHVL + ++ + FTV   I GN WLP+T + F +GL
Sbjct:  439 TVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525          
The following BLAST results are available for this feature:
BLAST of GR312954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
PME2_CITSI4.217e-4698.85Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
ADT1_GOSHI1.772e-4489.32ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT2_ARATH1.776e-3673.79ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT1_ARATH6.749e-3674.76ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT1_SOLTU1.151e-3575.73ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT2_SOLTU7.461e-3575.49ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT1_MAIZE5.179e-2866.02ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
PME17_ARATH1.507e-2763.22Probable pectinesterase/pectinesterase inhibitor 1... [more]
ADT2_MAIZE4.384e-2765.05ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
PME32_ARATH1.410e-2554.02Probable pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionC06054A09 RindPdigS Citrus sinensis cDNA clone N05B12, mRNA sequence.