GO242489

Overview
NameGO242489
Unique NameGO242489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242489 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.061e-13
Identity = 30/32 (93.75%), Postives = 32/32 (100.00%), Query Frame = 1
Query:    1 SWGESWGENGYYKICRGRNVCGVDSMVSTVAA 96
            SWGE+WGENGYYKICRGRN+CGVDSMVSTVAA
Sbjct:   59 SWGENWGENGYYKICRGRNICGVDSMVSTVAA 90          
BLAST of GO242489 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12
Identity = 29/34 (85.29%), Postives = 33/34 (97.06%), Query Frame = 1
Query:    1 SWGESWGENGYYKICRGRNVCGVDSMVSTVAAAV 102
            SWGE+WGENG+YKIC+GRN+CGVDSMVSTVAA V
Sbjct:  330 SWGETWGENGFYKICKGRNICGVDSMVSTVAATV 363          
BLAST of GO242489 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 1
Query:    1 SWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 99
            SWG++WGE GYYKICRGRNVCGVDSMVSTVAAA
Sbjct:  327 SWGQNWGEQGYYKICRGRNVCGVDSMVSTVAAA 359          
BLAST of GO242489 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12
Identity = 28/32 (87.50%), Postives = 32/32 (100.00%), Query Frame = 1
Query:    1 SWGESWGENGYYKICRGRNVCGVDSMVSTVAA 96
            SWGESWGENG+YKIC+GRN+CGVDS+VSTVAA
Sbjct:  327 SWGESWGENGFYKICKGRNICGVDSLVSTVAA 358          
The following BLAST results are available for this feature:
BLAST of GO242489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PAPA5_CARPA6.061e-1393.75Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
RD19A_ARATH1.350e-1285.29Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP_PEA1.763e-1290.91Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
A494_ARATH3.928e-1287.50Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank description1137 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1304 5, mRNA sequence.