GO242486

Overview
NameGO242486
Unique NameGO242486
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242486 vs. ExPASy Swiss-Prot
Match: TATA_SYNP6 (Sec-independent protein translocase protein tatA/E homolog OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tatA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = 1
Query:  223 FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPGE 408
            FG+G+PE++VI  +A LVFGPKKLPE+G+S+GK ++ FQ A++EFESE+K+E D     P E
Sbjct:    4 FGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPATPAE 65          
BLAST of GO242486 vs. ExPASy Swiss-Prot
Match: TATA_SYNE7 (Sec-independent protein translocase protein tatA/E homolog OS=Synechococcus elongatus (strain PCC 7942) GN=tatA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = 1
Query:  223 FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPPGE 408
            FG+G+PE++VI  +A LVFGPKKLPE+G+S+GK ++ FQ A++EFESE+K+E D     P E
Sbjct:    4 FGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPATPAE 65          
BLAST of GO242486 vs. ExPASy Swiss-Prot
Match: TATA_THEEB (Sec-independent protein translocase protein tatA/E homolog OS=Thermosynechococcus elongatus (strain BP-1) GN=tatA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.399e-14
Identity = 35/74 (47.30%), Postives = 54/74 (72.97%), Query Frame = 1
Query:  220 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKK-----EPDSETDPPGEKPTAIS 426
            +FG+G+PEL+VI  VA L+FGPKKLPE+G+S+GKT ++F++A++EF+ E+K+     E + +     E P  IS
Sbjct:    3 VFGIGLPELIVILVVALLIFGPKKLPEIGRSLGKTKRAFEEASREFQDEIKRQTAALEEEQQAKAEAESPREIS 76          
BLAST of GO242486 vs. ExPASy Swiss-Prot
Match: TATA_TRIEI (Sec-independent protein translocase protein tatA/E homolog OS=Trichodesmium erythraeum (strain IMS101) GN=tatA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 29/53 (54.72%), Postives = 45/53 (84.91%), Query Frame = 1
Query:  220 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 378
            +FG+G+PE++VI  VA L+FGPKKLPE+G+S+G+ + SF+  A++FE+E K+E
Sbjct:    3 IFGIGLPEMIVILVVALLIFGPKKLPEIGRSLGQAINSFKAGARDFENEFKRE 55          
BLAST of GO242486 vs. ExPASy Swiss-Prot
Match: TATA_PROM2 (Sec-independent protein translocase protein tatA/E homolog OS=Prochlorococcus marinus (strain MIT 9215) GN=tatA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 33/78 (42.31%), Postives = 55/78 (70.51%), Query Frame = 1
Query:  220 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSETDPP----GEKPTAISEERKD 441
            +FG+G+PE+ VI  +A L+FGPKKLPE+GK +GKT+KS ++A+ EF++E+ +  + E + P      +   I++E+ D
Sbjct:    3 IFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMNEEDESPKSIESNQTNEINQEKID 80          
BLAST of GO242486 vs. ExPASy Swiss-Prot
Match: TATA_PROM0 (Sec-independent protein translocase protein tatA/E homolog OS=Prochlorococcus marinus (strain MIT 9301) GN=tatA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 1
Query:  220 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESEL---KKEPDSETDP---PGEKPTAISEERKD 441
            +FG+G+PE+ VI  +A L+FGPKKLPE+GK +GKT+KS ++A+ EF++E+    KE D +  P      +   I++E+ D
Sbjct:    3 IFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMKEEDKDESPKSIESNQSNEINQEKID 82          
BLAST of GO242486 vs. ExPASy Swiss-Prot
Match: TATA_PROMS (Sec-independent protein translocase protein tatA/E homolog OS=Prochlorococcus marinus (strain AS9601) GN=tatA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 34/80 (42.50%), Postives = 55/80 (68.75%), Query Frame = 1
Query:  220 LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKK---EPDSETDP---PGEKPTAISEERKD 441
            +FG+G+PE+ VI  +A L+FGPKKLPE+GK +GKT+KS ++A+ EF++E+ +   E D +  P      +   I++E+ D
Sbjct:    3 IFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMNEQDKDESPISIESNQTNEINQEKID 82          
The following BLAST results are available for this feature:
BLAST of GO242486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TATA_SYNP65.816e-1556.45Sec-independent protein translocase protein tatA/E... [more]
TATA_SYNE75.816e-1556.45Sec-independent protein translocase protein tatA/E... [more]
TATA_THEEB8.399e-1447.30Sec-independent protein translocase protein tatA/E... [more]
TATA_TRIEI2.069e-1254.72Sec-independent protein translocase protein tatA/E... [more]
TATA_PROM27.861e-1242.31Sec-independent protein translocase protein tatA/E... [more]
TATA_PROM01.027e-1143.75Sec-independent protein translocase protein tatA/E... [more]
TATA_PROMS2.987e-1142.50Sec-independent protein translocase protein tatA/E... [more]
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Properties
Property NameValue
Genbank description1134 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1301 5, mRNA sequence.