GO242474

Overview
NameGO242474
Unique NameGO242474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242474 vs. ExPASy Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.034e-59
Identity = 107/115 (93.04%), Postives = 113/115 (98.26%), Query Frame = 1
Query:    1 GPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 345
            GPLLPTE+ERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDTT+VLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSLKSKRK
Sbjct:  176 GPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKSKRK 290          
BLAST of GO242474 vs. ExPASy Swiss-Prot
Match: HD1_BRANA (Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.034e-59
Identity = 107/115 (93.04%), Postives = 113/115 (98.26%), Query Frame = 1
Query:    1 GPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 345
            GPLLPTE+ERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDTT+VLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSLKSKRK
Sbjct:  179 GPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKSKRK 293          
BLAST of GO242474 vs. ExPASy Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.213e-57
Identity = 106/116 (91.38%), Postives = 113/116 (97.41%), Query Frame = 1
Query:    1 GPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 348
            GPL+PT++ERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTT++LK WWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NSQ+ T LKSKRKR
Sbjct:  200 GPLMPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSQTST-LKSKRKR 314          
BLAST of GO242474 vs. ExPASy Swiss-Prot
Match: KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.137e-53
Identity = 98/116 (84.48%), Postives = 107/116 (92.24%), Query Frame = 1
Query:    1 GPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 348
            GPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN  + T LKSKRKR
Sbjct:  312 GPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKR 427          
BLAST of GO242474 vs. ExPASy Swiss-Prot
Match: KNAT3_ARATH (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.320e-53
Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 1
Query:    1 GPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 345
            GPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN  S T LK+KRK
Sbjct:  304 GPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVLKNKRK 418          
BLAST of GO242474 vs. ExPASy Swiss-Prot
Match: KNAT4_ARATH (Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4 PE=1 SV=3)

HSP 1 Score: 205.297 bits (521), Expect = 2.800e-52
Identity = 95/115 (82.61%), Postives = 106/115 (92.17%), Query Frame = 1
Query:    1 GPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 345
            GPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK+WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN  S T  K+KR+
Sbjct:  268 GPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVSKNKRR 382          
BLAST of GO242474 vs. ExPASy Swiss-Prot
Match: LET12_SOLLC (Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum GN=LET12 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.280e-51
Identity = 94/118 (79.66%), Postives = 106/118 (89.83%), Query Frame = 1
Query:    1 GPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR*R 354
            GPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN  + +S KS+ +  R
Sbjct:  309 GPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSSSQKSQTQECR 426          
BLAST of GO242474 vs. ExPASy Swiss-Prot
Match: KNOSD_ORYSJ (Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica GN=OSH45 PE=2 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 92/112 (82.14%), Postives = 103/112 (91.96%), Query Frame = 1
Query:   10 LPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 345
            LPTE+ERSLMERVRQELK ELKQG+K ++ D+REEILRKRRAGKLPGDTTS LK WWQ H+KWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN  S TS+K+KRK
Sbjct:  255 LPTESERSLMERVRQELKHELKQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTSVKTKRK 366          
BLAST of GO242474 vs. ExPASy Swiss-Prot
Match: KNAT5_ARATH (Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 94/117 (80.34%), Postives = 108/117 (92.31%), Query Frame = 1
Query:    1 GPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSL-KSKRKR 348
            GPL+PTE ERSLMERV++ELK ELKQGFK +I D+REEI+RKRRAGKLPGDTTSVLK WW+ HSKWPYPTE+DKAKLV+ETGLQLKQINNWFINQRKRNW+SNS + ++L K+KRKR
Sbjct:  263 GPLVPTERERSLMERVKKELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNWNSNSSTSSTLTKNKRKR 379          
BLAST of GO242474 vs. ExPASy Swiss-Prot
Match: KNOSB_ORYSJ (Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.699e-49
Identity = 92/116 (79.31%), Postives = 103/116 (88.79%), Query Frame = 1
Query:    1 GPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 348
            GPL+ TE ERSL+ERVRQELK ELKQG++ ++ D+REEILRKRRAGKLPGDT S LK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN  S +S KSKRKR
Sbjct:  196 GPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPASSSSDKSKRKR 311          
The following BLAST results are available for this feature:
BLAST of GO242474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
KNAT7_ARATH4.034e-5993.04Homeobox protein knotted-1-like 7 OS=Arabidopsis t... [more]
HD1_BRANA4.034e-5993.04Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2... [more]
KNOS3_ORYSJ2.213e-5791.38Homeobox protein knotted-1-like 3 OS=Oryza sativa ... [more]
KNAP3_MALDO1.137e-5384.48Homeobox protein knotted-1-like 3 OS=Malus domesti... [more]
KNAT3_ARATH4.320e-5384.35Homeobox protein knotted-1-like 3 OS=Arabidopsis t... [more]
KNAT4_ARATH2.800e-5282.61Homeobox protein knotted-1-like 4 OS=Arabidopsis t... [more]
LET12_SOLLC5.280e-5179.66Homeobox protein knotted-1-like LET12 OS=Solanum l... [more]
KNOSD_ORYSJ1.536e-5082.14Homeobox protein knotted-1-like 13 OS=Oryza sativa... [more]
KNAT5_ARATH1.536e-5080.34Homeobox protein knotted-1-like 5 OS=Arabidopsis t... [more]
KNOSB_ORYSJ1.699e-4979.31Homeobox protein knotted-1-like 11 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank description1122 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1288 5, mRNA sequence.