GO242465

Overview
NameGO242465
Unique NameGO242465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242465 vs. ExPASy Swiss-Prot
Match: ATHB7_ARATH (Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.731e-48
Identity = 113/211 (53.55%), Postives = 141/211 (66.82%), Query Frame = 3
Query:    3 LEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCGQ--VEGVNSMESELDNGDRDTNKCESEVKPSLSAELRLG---------VLSDDD----SSIKTEYFGLHEDEP-NLMTMVEPAESSMTSPEDWGNFESD--GLFDQSSSEYQWWDFWS 581
            LEPRKK+QLA+ELGLQPRQVAIWFQNKRARWKSKQLE +YNIL+ N++NLAS+FE+LKKEKQALV +LQ+  E  Q K + E     ERQC G   V  ++S   E +N +    K E EV+P +  +   G            DDD    ++IK EYFG  E+EP +LM +VEPA+S +TS +DW  F+SD   L DQSS+ Y W DFWS
Sbjct:   54 LEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEE-----ERQCSGDQAVVALSSTHHESENEENRRRKPE-EVRPEMEMKDDKGHHGVMCDHHDYEDDDNGYSNNIKREYFGGFEEEPDHLMNIVEPADSCLTSSDDWRGFKSDTTTLLDQSSNNYPWRDFWS 258          
BLAST of GO242465 vs. ExPASy Swiss-Prot
Match: ATB12_ARATH (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.914e-47
Identity = 105/196 (53.57%), Postives = 135/196 (68.88%), Query Frame = 3
Query:    3 LEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCGQVEGVNSMESELDNGDRDTNKCESEVKPSLSAELRLGVLSDDDSSIKTEYFGLHED-EPNLMTMVEPAESS-MTSPEDWGNFESDGLFDQSSSEY-QWWDFWS 581
            LEPRKK+Q+A+ELGLQPRQVAIWFQNKRARWK+KQLE++YN L+AN+NNLAS+FE +KKEKQ+LV +LQ+ NE +Q +P+ E       +CCG      S  +E  NG       +SE +  L     L    D +++IKTEYFG  E+ +  LM +VE A+ S +TS E+WG F SD L DQSSS Y  WW+FWS
Sbjct:   52 LEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQ-RPKEE----KHHECCGDQGLALSSSTESHNG-------KSEPEGRLDQGSVLCNDGDYNNNIKTEYFGFEEETDHELMNIVEKADDSCLTSSENWGGFNSDSLLDQSSSNYPNWWEFWS 235          
BLAST of GO242465 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSJ (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.991e-25
Identity = 81/203 (39.90%), Postives = 109/203 (53.69%), Query Frame = 3
Query:    3 LEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCGQVEGVNSMESELDNGDRDTNKCESE---VKPSLSAELRLGVLSDD-DSSIKTEYFGLHEDEPNL----MTMVEPAESSMTSPEDWGNFESD--GLFDQSSSEYQWWDFWS 581
            LEPR+KLQLA+ELGLQPRQVAIWFQNKRARWKSKQLER+Y+ L+ +++ L   +E+LKKEK AL+ QL+K  E+LQ    +   +  +    G V G+   E  +  G   T    +E      + +A+L     SDD D+ +       H   P       T  EPA    +      NF S      +Q+ S   WW+F S
Sbjct:   52 LEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQEPRGKYGDNAGDDARSGGVAGMKK-EEFVGAGGAATLYSSAEGGGTTTTTTAKLMPHFGSDDVDAGLFLRPSSQHHPPPPHAGAGFTSSEPAADHQSF-----NFHSSWPSSTEQTCSSTPWWEFES 248          
BLAST of GO242465 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSI (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 5.991e-25
Identity = 81/203 (39.90%), Postives = 109/203 (53.69%), Query Frame = 3
Query:    3 LEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCGQVEGVNSMESELDNGDRDTNKCESE---VKPSLSAELRLGVLSDD-DSSIKTEYFGLHEDEPNL----MTMVEPAESSMTSPEDWGNFESD--GLFDQSSSEYQWWDFWS 581
            LEPR+KLQLA+ELGLQPRQVAIWFQNKRARWKSKQLER+Y+ L+ +++ L   +E+LKKEK AL+ QL+K  E+LQ    +   +  +    G V G+   E  +  G   T    +E      + +A+L     SDD D+ +       H   P       T  EPA    +      NF S      +Q+ S   WW+F S
Sbjct:   52 LEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQEPRGKYGDNAGDDARSGGVAGMKK-EEFVGAGGAATLYSSAEGGGTTTTTTAKLMPHFGSDDVDAGLFLRPSSQHHPPPPHAGAGFTSSEPAADHQSF-----NFHSSWPSSTEQTCSSTPWWEFES 248          
BLAST of GO242465 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSJ (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. japonica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 9.565e-23
Identity = 55/113 (48.67%), Postives = 72/113 (63.72%), Query Frame = 3
Query:    3 LEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCGQVEGVNSMESELDNGDRDTN 341
            LEPR+K +LA+ELGLQPRQVAIWFQNKRARW+SKQLE DY  L++ ++ L SR E+LK+EK AL +QL +  E L+ +  R     +            S   E+D+ D   N
Sbjct:   96 LEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRERLREREERSGNGGAATTAASSSSCNGSGSEEVDDDDDKRN 208          
BLAST of GO242465 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSI (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 9.565e-23
Identity = 55/113 (48.67%), Postives = 72/113 (63.72%), Query Frame = 3
Query:    3 LEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCGQVEGVNSMESELDNGDRDTN 341
            LEPR+K +LA+ELGLQPRQVAIWFQNKRARW+SKQLE DY  L++ ++ L SR E+LK+EK AL +QL +  E L+ +  R     +            S   E+D+ D   N
Sbjct:   96 LEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRERLREREERSGNGGAATTAASSSSCNGSGSEEVDDDDDKRN 208          
BLAST of GO242465 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSI (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. indica GN=HOX24 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 3.402e-20
Identity = 51/87 (58.62%), Postives = 66/87 (75.86%), Query Frame = 3
Query:    3 LEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPS 263
            LEPR+K +LA+ELGLQPRQVAIWFQNKRARW+SKQ+E DY  L+A ++ L +R E+L++EK AL  Q+   +EL      R+DQS S
Sbjct:   88 LEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALAAQV---DELRGKLNERQDQSGS 171          
BLAST of GO242465 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSJ (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. japonica GN=HOX24 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.803e-20
Identity = 51/87 (58.62%), Postives = 66/87 (75.86%), Query Frame = 3
Query:    3 LEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPS 263
            LEPR+K +LA+ELGLQPRQVAIWFQNKRARW+SKQ+E DY  L+A ++ L +R E+L++EK AL  Q+   +EL      R+DQS S
Sbjct:   87 LEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALADQV---DELRGKLNERQDQSGS 170          
BLAST of GO242465 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.205e-19
Identity = 46/110 (41.82%), Postives = 71/110 (64.55%), Query Frame = 3
Query:    3 LEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCGQVEGVNSMESELDNGDR 332
            LEP +K QLAK+LGLQPRQVA+WFQN+RARWK+KQLERDY++L++ ++ L S ++++  +   L  ++    E LQ K    ++ P +     Q++ V    + +   DR
Sbjct:   90 LEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANEPPGQVPEPNQLDPVYINAAAIKTEDR 199          
BLAST of GO242465 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.429e-18
Identity = 39/84 (46.43%), Postives = 64/84 (76.19%), Query Frame = 3
Query:    3 LEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQ 254
            LEP +K++LA+ELGLQPRQVA+WFQN+RARWK+KQLE+DY +L+  +++L   F++L+++ ++L+ ++ K    L      E++
Sbjct:   84 LEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEE 167          
The following BLAST results are available for this feature:
BLAST of GO242465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
ATHB7_ARATH1.731e-4853.55Homeobox-leucine zipper protein ATHB-7 OS=Arabidop... [more]
ATB12_ARATH1.914e-4753.57Homeobox-leucine zipper protein ATHB-12 OS=Arabido... [more]
HOX6_ORYSJ5.991e-2539.90Homeobox-leucine zipper protein HOX6 OS=Oryza sati... [more]
HOX6_ORYSI5.991e-2539.90Homeobox-leucine zipper protein HOX6 OS=Oryza sati... [more]
HOX22_ORYSJ9.565e-2348.67Homeobox-leucine zipper protein HOX22 OS=Oryza sat... [more]
HOX22_ORYSI9.565e-2348.67Homeobox-leucine zipper protein HOX22 OS=Oryza sat... [more]
HOX24_ORYSI3.402e-2058.62Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
HOX24_ORYSJ5.803e-2058.62Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
HAT5_ARATH2.205e-1941.82Homeobox-leucine zipper protein HAT5 OS=Arabidopsi... [more]
ATHB6_ARATH1.429e-1846.43Homeobox-leucine zipper protein ATHB-6 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank description1113 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1279 5, mRNA sequence.