GO242450

Overview
NameGO242450
Unique NameGO242450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242450 vs. ExPASy Swiss-Prot
Match: SRK2H_ARATH (Serine/threonine-protein kinase SRK2H OS=Arabidopsis thaliana GN=SRK2H PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.449e-43
Identity = 83/102 (81.37%), Postives = 92/102 (90.20%), Query Frame = 3
Query:    3 KTIQKIMAVQYRIPDYVHISQECRHLLSRLFVANPSRRITLKEIKNHPWFLKNLPRELTESAQAVYYQRENPSFSLQSVEEIMKIVGEARNPPPSSRTVKNF 308
            KTIQ+IMAVQY+IPDYVHISQECRHLLSR+FV N ++RITLKEIK HPW+LKNLP+ELTE AQA YY+RE PSFSLQSVE+IMKIVGEARNP PSS  VK F
Sbjct:  211 KTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGF 312          
BLAST of GO242450 vs. ExPASy Swiss-Prot
Match: SRK2A_ARATH (Serine/threonine-protein kinase SRK2A OS=Arabidopsis thaliana GN=SRK2A PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.215e-42
Identity = 87/153 (56.86%), Postives = 107/153 (69.93%), Query Frame = 3
Query:    3 KTIQKIMAVQYRIPDYVHISQECRHLLSRLFVANPSRRITLKEIKNHPWFLKNLPRELTESAQAVYYQRENPSFSLQSVEEIMKIVGEARNPPPSSRTVKNFGWGA----------XXXXXXXXXXXXXXXXXXXXXXKRVKEVHASGEYQVN 431
            KTIQKIMAVQY+IPDYVHISQ+C++LLSR+FVAN  +RIT+ EIK H WFLKNLPRELTE+AQA Y+++ENP+FSLQ+VEEIMKIV +A+ PPP SR++  FGWG                                 K VKEVHASGE +++
Sbjct:  211 KTIQKIMAVQYKIPDYVHISQDCKNLLSRIFVANSLKRITIAEIKKHSWFLKNLPRELTETAQAAYFKKENPTFSLQTVEEIMKIVADAKTPPPVSRSIGGFGWGGNGDADGKEEDAEDVEEEEEEVEEEEDDEDEYDKTVKEVHASGEVRIS 363          
BLAST of GO242450 vs. ExPASy Swiss-Prot
Match: SAPK7_ORYSJ (Serine/threonine-protein kinase SAPK7 OS=Oryza sativa subsp. japonica GN=SAPK7 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.344e-41
Identity = 84/149 (56.38%), Postives = 110/149 (73.83%), Query Frame = 3
Query:    3 KTIQKIMAVQYRIPDYVHISQECRHLLSRLFVANPSRRITLKEIKNHPWFLKNLPRELTESAQAVYYQREN--PSFSLQSVEEIMKIVGEARNPPPSSRTVKNFGW----GAXXXXXXXXXXXXXXXXXXXXXXKRVKEVHASGEYQVN 431
            KTI +IM++QY+IP+YVH+SQ+CR LLSR+FVANP++RIT++EI+NHPWFLKNLPRELTE+AQA+YY+++N  P++S+QSVEEIMKIV EAR PP SS  V  FGW                            K+VK+VHASGE+Q++
Sbjct:  211 KTIGRIMSIQYKIPEYVHVSQDCRQLLSRIFVANPAKRITIREIRNHPWFLKNLPRELTEAAQAMYYKKDNSAPTYSVQSVEEIMKIVEEARTPPRSSTPVAGFGWQEEDEQEDNSKKPEEEQEEEEDAEDEYDKQVKQVHASGEFQLS 359          
BLAST of GO242450 vs. ExPASy Swiss-Prot
Match: SRK2G_ARATH (Serine/threonine-protein kinase SRK2G OS=Arabidopsis thaliana GN=SRK2G PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.994e-41
Identity = 82/106 (77.36%), Postives = 95/106 (89.62%), Query Frame = 3
Query:    3 KTIQKIMAVQYRIPDYVHISQECRHLLSRLFVANPSRRITLKEIKNHPWFLKNLPRELTESAQAVYYQRENPSFSLQSVEEIMKIVGEARNPPPSSRTVKNFGWGA 320
            KTIQ+IMAVQY+IPDYVHISQEC+HLLSR+FV N ++RITLKEIKNHPW+LKNLP+EL ESAQA YY+R+  SFSLQSVE+IMKIVGEARNP PS+  VK+ G GA
Sbjct:  211 KTIQRIMAVQYKIPDYVHISQECKHLLSRIFVTNSAKRITLKEIKNHPWYLKNLPKELLESAQAAYYKRDT-SFSLQSVEDIMKIVGEARNPAPSTSAVKSSGSGA 315          
BLAST of GO242450 vs. ExPASy Swiss-Prot
Match: SRK2B_ARATH (Serine/threonine-protein kinase SRK2B OS=Arabidopsis thaliana GN=SRK2B PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.630e-40
Identity = 75/105 (71.43%), Postives = 92/105 (87.62%), Query Frame = 3
Query:    3 KTIQKIMAVQYRIPDYVHISQECRHLLSRLFVANPSRRITLKEIKNHPWFLKNLPRELTESAQAVYYQRENPSFSLQSVEEIMKIVGEARNPPPSSRTVKNFGWG 317
            KTIQ+IMAV+Y+IPDYVHISQ+C+HLLSR+FV N ++RIT+ +IK HPWFLKNLPRELTE AQA Y+++ENP+FSLQSVEEIMKIV EA+ P   SR++  FGWG
Sbjct:  211 KTIQRIMAVKYKIPDYVHISQDCKHLLSRIFVTNSNKRITIGDIKKHPWFLKNLPRELTEIAQAAYFRKENPTFSLQSVEEIMKIVEEAKTPARVSRSIGAFGWG 315          
BLAST of GO242450 vs. ExPASy Swiss-Prot
Match: SAPK4_ORYSJ (Serine/threonine-protein kinase SAPK4 OS=Oryza sativa subsp. japonica GN=SAPK4 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 9.013e-38
Identity = 86/146 (58.90%), Postives = 104/146 (71.23%), Query Frame = 3
Query:    3 KTIQKIMAVQYRIPDYVHISQECRHLLSRLFVANPSRRITLKEIKNHPWFLKNLPRELTESAQAVYYQREN--PSFSLQSVEEIMKIVGEARNPPPSSRTVKNFGWGA-XXXXXXXXXXXXXXXXXXXXXXKRVKEVHASGEYQVN 431
            KTIQ+IM+VQY+IPDYVHIS EC+ L++R+FV NP RRIT+KEIK+HPWFLKNLPRELTE+AQA+YY+R+N  PSFS Q+ EEIMKIV EAR  P SSRT      G+                       KRVKEVHASGE +++
Sbjct:  211 KTIQRIMSVQYKIPDYVHISAECKQLIARIFVNNPLRRITMKEIKSHPWFLKNLPRELTETAQAMYYRRDNSVPSFSDQTSEEIMKIVQEARTMPKSSRTGYWSDAGSDEEEKEEEERPEENEEEEEDEYDKRVKEVHASGELRMS 356          
BLAST of GO242450 vs. ExPASy Swiss-Prot
Match: SAPK6_ORYSJ (Serine/threonine-protein kinase SAPK6 OS=Oryza sativa subsp. japonica GN=SAPK6 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.008e-37
Identity = 71/106 (66.98%), Postives = 93/106 (87.74%), Query Frame = 3
Query:    3 KTIQKIMAVQYRIPDYVHISQECRHLLSRLFVANPSRRITLKEIKNHPWFLKNLPRELTESAQAVYYQRENP--SFSLQSVEEIMKIVGEARNPPPSSRTVKNFGW 314
            KTI +I+++QY+IP+YVHISQ+CR LLSR+FVANP++RIT++EI+NHPWF+KNLPRELTE+AQA YY+++N   +FS Q+V+EIMKIV EA+ PPPSS  V  FGW
Sbjct:  211 KTIGRIVSIQYKIPEYVHISQDCRQLLSRIFVANPAKRITIREIRNHPWFMKNLPRELTEAAQAKYYKKDNSARTFSDQTVDEIMKIVQEAKTPPPSSTPVAGFGW 316          
BLAST of GO242450 vs. ExPASy Swiss-Prot
Match: SRK2J_ARATH (Serine/threonine-protein kinase SRK2J OS=Arabidopsis thaliana GN=SRK2J PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.919e-33
Identity = 73/105 (69.52%), Postives = 83/105 (79.05%), Query Frame = 3
Query:    3 KTIQKIMAVQYRIPDYVHISQECRHLLSRLFVANPSRRITLKEIKNHPWFLKNLPRELTESAQAVYYQRENP--SFSLQSVEEIMKIVGEARNPPPSSRTVKNFG 311
            KT+QKIMAV Y+IP YVHIS++CR LLSR+FVANP  R TLKEIK+H WFLKNLPREL E AQA+YYQR     +FS Q VEEIMKIVGEAR  P  SR V++ G
Sbjct:  211 KTVQKIMAVNYKIPGYVHISEDCRKLLSRIFVANPLHRSTLKEIKSHAWFLKNLPRELKEPAQAIYYQRNVNLINFSPQRVEEIMKIVGEARTIPNLSRPVESLG 315          
BLAST of GO242450 vs. ExPASy Swiss-Prot
Match: SAPK5_ORYSJ (Serine/threonine-protein kinase SAPK5 OS=Oryza sativa subsp. japonica GN=SAPK5 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.118e-33
Identity = 69/119 (57.98%), Postives = 85/119 (71.43%), Query Frame = 3
Query:    3 KTIQKIMAVQYRIPDYVHISQECRHLLSRLFVANPSRRITLKEIKNHPWFLKNLPRELTESAQAVYYQREN--------------PSFSLQSVEEIMKIVGEARNPPPSSRTVKNFGWG 317
            KTI +IM+VQY+IP+YVH+SQ CRHLLSR+FVANP +RI++ EIK+HPWFLKNLPREL E AQAVYY R                 +FS QSVE+IM+IV EA+  P   + V  +GWG
Sbjct:  211 KTISRIMSVQYKIPEYVHVSQPCRHLLSRIFVANPYKRISMGEIKSHPWFLKNLPRELKEEAQAVYYNRRGADHAASSASSAAAAAAFSPQSVEDIMRIVQEAQTVPKPDKPVSGYGWG 329          
BLAST of GO242450 vs. ExPASy Swiss-Prot
Match: SAPK2_ORYSJ (Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. japonica GN=SAPK2 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.303e-25
Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 3
Query:    3 KTIQKIMAVQYRIPDYVHISQECRHLLSRLFVANPSRRITLKEIKNHPWFLKNLPRELTESAQAVYYQRENPSFSLQSVEEIMKIVGEARNPPPSSR 293
            KTI +I++VQY +PDYV +S ECRHLLSR+FVANP +RIT+ EIKNHPWFLKNLP E+T+  Q +  Q  + +   Q +EEIM I+ EAR P   S+
Sbjct:  211 KTITRILSVQYMVPDYVRVSMECRHLLSRIFVANPEQRITIPEIKNHPWFLKNLPIEMTDEYQ-MSVQMNDINTPSQGLEEIMAIIQEARKPGDGSK 306          
The following BLAST results are available for this feature:
BLAST of GO242450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SRK2H_ARATH2.449e-4381.37Serine/threonine-protein kinase SRK2H OS=Arabidops... [more]
SRK2A_ARATH1.215e-4256.86Serine/threonine-protein kinase SRK2A OS=Arabidops... [more]
SAPK7_ORYSJ1.344e-4156.38Serine/threonine-protein kinase SAPK7 OS=Oryza sat... [more]
SRK2G_ARATH2.994e-4177.36Serine/threonine-protein kinase SRK2G OS=Arabidops... [more]
SRK2B_ARATH9.630e-4071.43Serine/threonine-protein kinase SRK2B OS=Arabidops... [more]
SAPK4_ORYSJ9.013e-3858.90Serine/threonine-protein kinase SAPK4 OS=Oryza sat... [more]
SAPK6_ORYSJ2.008e-3766.98Serine/threonine-protein kinase SAPK6 OS=Oryza sat... [more]
SRK2J_ARATH3.919e-3369.52Serine/threonine-protein kinase SRK2J OS=Arabidops... [more]
SAPK5_ORYSJ5.118e-3357.98Serine/threonine-protein kinase SAPK5 OS=Oryza sat... [more]
SAPK2_ORYSJ2.303e-2557.73Serine/threonine-protein kinase SAPK2 OS=Oryza sat... [more]

Pages

back to top
Properties
Property NameValue
Genbank description1098 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1262 5, mRNA sequence.