GO242449

Overview
NameGO242449
Unique NameGO242449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242449 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 5.729e-39
Identity = 72/91 (79.12%), Postives = 82/91 (90.11%), Query Frame = 2
Query:    2 SPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 274
            SP GESAVDC +LSSMPN++FT+GGK F+L+P +YVL+VGEG  AQCISGFTA DVAPP GPLWILGDVFMG+YHTVFDYGNL +GFAEAA
Sbjct:  383 SPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQYVLKVGEGATAQCISGFTAMDVAPPHGPLWILGDVFMGQYHTVFDYGNLRVGFAEAA 473          
BLAST of GO242449 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 73/91 (80.22%), Postives = 80/91 (87.91%), Query Frame = 2
Query:    2 SPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 274
            SP G+SAVDC  LSSMP VSFTIGGK+FDLAP EY+L+VGEG  AQCISGFTAFD+ PPRGPLWILGDVFMGRYHTVFD+G L +G AEAA
Sbjct:  423 SPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYILKVGEGPVAQCISGFTAFDIPPPRGPLWILGDVFMGRYHTVFDFGKLRVGSAEAA 513          
BLAST of GO242449 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.476e-36
Identity = 70/91 (76.92%), Postives = 77/91 (84.62%), Query Frame = 2
Query:    2 SPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 274
            SP GESAVDC +L SMP++ FTIGGK F L P EY+L+VGEG AAQCISGFTA D+ PPRGPLWILGDVFMG YHTVFDYG L IGFA+AA
Sbjct:  418 SPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 508          
BLAST of GO242449 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 67/91 (73.63%), Postives = 78/91 (85.71%), Query Frame = 2
Query:    2 SPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 274
            SP GES+VDC +L+SMP +SFTIGGK F L P EY+L+VGEG AAQCISGFTA D+ PPRGPLWILGDVFMG YHTVFDYG + +GFA++A
Sbjct:  419 SPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYGKMRVGFAKSA 509          
BLAST of GO242449 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.168e-29
Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 2
Query:    2 SPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 274
            SPNGES V C  +S MPN++FTI  K F L P +Y++++ +G    CISGF AFD+ PPRGPLWILGDVFMG YHTVFD+G   IGFA++A
Sbjct:  406 SPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIGFAKSA 496          
BLAST of GO242449 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 47/88 (53.41%), Postives = 59/88 (67.05%), Query Frame = 2
Query:    8 NGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEA 271
            NGE  VDC  +  +P +SF +GGK FDL   +YVL V +     C+SGF   D+ PP GPLWILGDVF+G+Y+T FD GN  +GFA A
Sbjct:  299 NGEYMVDCSLIPKLPKISFVLGGKSFDLEGADYVLRVAQMGKTICLSGFMGIDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFATA 386          
BLAST of GO242449 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.364e-22
Identity = 44/88 (50.00%), Postives = 62/88 (70.45%), Query Frame = 2
Query:   11 GESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 274
            GE  + C+ +S++P ++  +GGK + L+P +Y L+V +     C+SGF   D+ PP GPLWILGDVF+GRY+TVFD  N  +GFAEAA
Sbjct:  323 GEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA 410          
BLAST of GO242449 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 2
Query:    8 NGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFA 265
            NGE  V C  LS MP+V+FTI G  + L P +Y+LE G G    C SGF   D++PP GPLWILGDVF+G+Y++VFD GN  +GFA
Sbjct:  303 NGEYGVSCSTLSLMPSVTFTINGLDYSLTPEQYMLEDGGGY---CSSGFQGLDISPPSGPLWILGDVFIGQYYSVFDRGNNRVGFA 385          
BLAST of GO242449 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 44/87 (50.57%), Postives = 61/87 (70.11%), Query Frame = 2
Query:   11 GESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEA 271
            GE  + C+ +SS+P V   +GGK ++L P++Y+L+V +G    C+SGF   D+ PP GPLWILGDVF+G Y+TVFD  N  +GFA A
Sbjct:  321 GEYMIPCEKVSSLPTVYLKLGGKNYELHPDKYILKVSQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGSYYTVFDRDNNRVGFANA 407          
BLAST of GO242449 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 43/87 (49.43%), Postives = 62/87 (71.26%), Query Frame = 2
Query:    8 NGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQ-CISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFA 265
            NGE  V+C  + S+PN++F +GG+ FDL   +Y+L++  G     C+SGF   D+  P GPLWILGDVF+GR+++VFD+GN  +GFA
Sbjct:  306 NGEYEVECSKIPSLPNITFNLGGQNFDLQGKDYILQMSNGNGGSTCLSGFMGMDIPAPAGPLWILGDVFIGRFYSVFDHGNKRVGFA 392          
The following BLAST results are available for this feature:
BLAST of GO242449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
CYPR1_CYNCA5.729e-3979.12Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPR_CUCPE1.667e-3880.22Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPR_HORVU3.476e-3676.92Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR1_ORYSJ1.011e-3573.63Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPRX_ORYSJ9.168e-2961.54Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPP_AEDAE3.731e-2253.41Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATD_HUMAN6.364e-2250.00Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATE_RANCA1.852e-2155.81Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
CATD_MOUSE1.852e-2150.57Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
ASP3_CAEEL1.852e-2149.43Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]

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Properties
Property NameValue
Genbank description1097 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1261 5, mRNA sequence.