GO242446

Overview
NameGO242446
Unique NameGO242446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242446 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.420e-17
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 2
Query:    2 LGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 145
            LG   LTGEK ISPGEECDK+FTAICQGKIIDPLLECL +W+G+PLPI
Sbjct:  676 LGTSLLTGEKVISPGEECDKLFTAICQGKIIDPLLECLGDWNGAPLPI 723          
BLAST of GO242446 vs. ExPASy Swiss-Prot
Match: PAL1_PRUAV (Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=PAL1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.420e-17
Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 2
Query:    2 LGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 145
            LGA YLTGEK  SPGEECDKVFTAIC+GKIIDP+L+CL+ W+G+PLPI
Sbjct:  669 LGAEYLTGEKVRSPGEECDKVFTAICEGKIIDPILDCLEGWNGAPLPI 716          
BLAST of GO242446 vs. ExPASy Swiss-Prot
Match: PAL2_PHAVU (Phenylalanine ammonia-lyase class 2 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.854e-17
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 2
Query:    2 LGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 145
            LG   LTGEK ISPGEECDKVF+A+CQGKIIDPLLECL EW+G+PLPI
Sbjct:  664 LGTSLLTGEKVISPGEECDKVFSAMCQGKIIDPLLECLGEWNGAPLPI 711          
BLAST of GO242446 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.131e-17
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 2
Query:    2 LGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 145
            LG   LTGEK ISPGEECDK+FTAICQGKIIDPLL+CL +W+G+PLPI
Sbjct:  675 LGTGLLTGEKVISPGEECDKLFTAICQGKIIDPLLQCLGDWNGAPLPI 722          
BLAST of GO242446 vs. ExPASy Swiss-Prot
Match: PAL1_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=PAL PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.131e-17
Identity = 38/48 (79.17%), Postives = 41/48 (85.42%), Query Frame = 2
Query:    2 LGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 145
            LG   LTGEK  SPGEECDKVFTA+C+G IIDPLLECLK WDG+PLPI
Sbjct:  659 LGTELLTGEKVRSPGEECDKVFTAMCEGSIIDPLLECLKSWDGAPLPI 706          
BLAST of GO242446 vs. ExPASy Swiss-Prot
Match: PALY_TRISU (Phenylalanine ammonia-lyase OS=Trifolium subterraneum GN=PAL1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.203e-17
Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = 2
Query:    2 LGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 145
            LG   LTGE+ ISPGEECDK+FTA+CQGKIIDPLL+CL EW+G+PLPI
Sbjct:  677 LGTSLLTGERVISPGEECDKLFTAMCQGKIIDPLLKCLGEWNGAPLPI 724          
BLAST of GO242446 vs. ExPASy Swiss-Prot
Match: PAL2_POPKI (Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis GN=PALG2B PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16
Identity = 39/48 (81.25%), Postives = 41/48 (85.42%), Query Frame = 2
Query:    2 LGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 145
            LG   LTGEK  SPGEE DKVFTAIC GK+IDPLLECLKEWDG+PLPI
Sbjct:  662 LGTSLLTGEKVKSPGEEFDKVFTAICAGKLIDPLLECLKEWDGAPLPI 709          
BLAST of GO242446 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.570e-16
Identity = 38/48 (79.17%), Postives = 42/48 (87.50%), Query Frame = 2
Query:    2 LGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 145
            LGA  LTGEK  SPGEECDKVFTA+C G+IID LLECLKEW+G+PLPI
Sbjct:  664 LGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGAPLPI 711          
BLAST of GO242446 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.570e-16
Identity = 38/48 (79.17%), Postives = 42/48 (87.50%), Query Frame = 2
Query:    2 LGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 145
            LGA  LTGEK  SPGEECDKVFTA+C G+IID LLECLKEW+G+PLPI
Sbjct:  664 LGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGAPLPI 711          
BLAST of GO242446 vs. ExPASy Swiss-Prot
Match: PALY_STYHU (Phenylalanine ammonia-lyase OS=Stylosanthes humilis GN=PAL17.1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.050e-16
Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 2
Query:    2 LGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 145
            LG   LTGEK  SPGEECDK+FTA+CQGKIIDPLLEC+ EW+G+PLP+
Sbjct:  667 LGTEMLTGEKVRSPGEECDKLFTAMCQGKIIDPLLECIGEWNGAPLPL 714          
The following BLAST results are available for this feature:
BLAST of GO242446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
PAL2_PEA1.420e-1781.25Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PAL1_PRUAV1.420e-1779.17Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=P... [more]
PAL2_PHAVU1.854e-1781.25Phenylalanine ammonia-lyase class 2 OS=Phaseolus v... [more]
PAL1_PEA4.131e-1779.17Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]
PAL1_IPOBA4.131e-1779.17Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=... [more]
PALY_TRISU9.203e-1777.08Phenylalanine ammonia-lyase OS=Trifolium subterran... [more]
PAL2_POPKI1.202e-1681.25Phenylalanine ammonia-lyase G2B OS=Populus kitakam... [more]
PAL3_TOBAC1.570e-1679.17Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL2_TOBAC1.570e-1679.17Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PALY_STYHU2.050e-1675.00Phenylalanine ammonia-lyase OS=Stylosanthes humili... [more]

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Properties
Property NameValue
Genbank description1094 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1258 5, mRNA sequence.