GO242425

Overview
NameGO242425
Unique NameGO242425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242425 vs. ExPASy Swiss-Prot
Match: GCSP_SOLTU (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Solanum tuberosum GN=GDCSP PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 5.694e-73
Identity = 127/142 (89.44%), Postives = 132/142 (92.96%), Query Frame = 1
Query:    1 EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 426
            EFI+DLRG KNTAGIEPEDVAKRL+DYGFHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIREEIAQIE G  DI+NNVLKGAPHPPS+LM D WTKPYSREYAAYPA WLR AKFWP TGRVDNVYGDRNLICTLLP
Sbjct:  882 EFIIDLRGFKNTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAQIEKGNVDINNNVLKGAPHPPSMLMADAWTKPYSREYAAYPAPWLRSAKFWPTTGRVDNVYGDRNLICTLLP 1023          
BLAST of GO242425 vs. ExPASy Swiss-Prot
Match: GCSP_PEA (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Pisum sativum GN=GDCSP PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.657e-72
Identity = 124/142 (87.32%), Postives = 133/142 (93.66%), Query Frame = 1
Query:    1 EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 426
            EFI+DLRG KNTAGIEPEDVAKRLMDYGFHGPTMSWPV GTLMIEPTESESK ELDR+CDALISIR+EIA++E G AD+HNNVLKGAPHPPSLLM D WTKPYSREYAA+PA+WLR AKFWP TGRVDNVYGDRNL+CTLLP
Sbjct:  903 EFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGTLMIEPTESESKAELDRFCDALISIRKEIAEVEKGNADVHNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAAWLRGAKFWPTTGRVDNVYGDRNLVCTLLP 1044          
BLAST of GO242425 vs. ExPASy Swiss-Prot
Match: GCSP2_ARATH (Glycine dehydrogenase [decarboxylating] 2, mitochondrial OS=Arabidopsis thaliana GN=At4g33010 PE=1 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 3.691e-72
Identity = 125/142 (88.03%), Postives = 131/142 (92.25%), Query Frame = 1
Query:    1 EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 426
            EFI+DLRG KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIREEIAQIE G AD+ NNVLKGAPHPPSLLM DTW KPYSREYAA+PA WLR +KFWP TGRVDNVYGDR L+CTLLP
Sbjct:  885 EFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAQIEKGNADVQNNVLKGAPHPPSLLMADTWKKPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRKLVCTLLP 1026          
BLAST of GO242425 vs. ExPASy Swiss-Prot
Match: GCSP1_ARATH (Glycine dehydrogenase [decarboxylating] 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSP PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.125e-71
Identity = 124/142 (87.32%), Postives = 131/142 (92.25%), Query Frame = 1
Query:    1 EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 426
            EFI+DLRG KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIREEI+QIE G AD +NNVLKGAPHPPSLLM DTW KPYSREYAA+PA WLR +KFWP TGRVDNVYGDRNL+CTL P
Sbjct:  891 EFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEISQIEKGNADPNNNVLKGAPHPPSLLMADTWKKPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRNLVCTLQP 1032          
BLAST of GO242425 vs. ExPASy Swiss-Prot
Match: GCSPA_FLAPR (Glycine dehydrogenase [decarboxylating] A, mitochondrial OS=Flaveria pringlei GN=GDCSPA PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.111e-68
Identity = 121/142 (85.21%), Postives = 128/142 (90.14%), Query Frame = 1
Query:    1 EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 426
            EFIVDLR LK TAGIEPEDVAKRL+DYGFHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIR+EIA+IE G  D++NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P
Sbjct:  884 EFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDLNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1025          
BLAST of GO242425 vs. ExPASy Swiss-Prot
Match: GCSP_FLAAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria anomala GN=GDCSP PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.896e-68
Identity = 121/142 (85.21%), Postives = 127/142 (89.44%), Query Frame = 1
Query:    1 EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 426
            EFIVDLR LK TAGIEPEDVAKRL+DYGFHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIR+EIA+IE G  D +NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P
Sbjct:  881 EFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1022          
BLAST of GO242425 vs. ExPASy Swiss-Prot
Match: GCSPB_FLAPR (Glycine dehydrogenase [decarboxylating] B, mitochondrial OS=Flaveria pringlei GN=GDCSPB PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.896e-68
Identity = 121/142 (85.21%), Postives = 127/142 (89.44%), Query Frame = 1
Query:    1 EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 426
            EFIVDLR LK TAGIEPEDVAKRL+DYGFHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIR+EIA+IE G  D +NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P
Sbjct:  881 EFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1022          
BLAST of GO242425 vs. ExPASy Swiss-Prot
Match: GCSP_FLATR (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria trinervia GN=GDCSPA PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.476e-68
Identity = 121/142 (85.21%), Postives = 127/142 (89.44%), Query Frame = 1
Query:    1 EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 426
            EFIVDLR LK TAGIEPEDVAKRL+DYGFHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIR+EIA+IE G  D +NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P
Sbjct:  881 EFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGTVDFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1022          
BLAST of GO242425 vs. ExPASy Swiss-Prot
Match: GCSP_THEEB (Glycine dehydrogenase [decarboxylating] OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.904e-52
Identity = 95/139 (68.35%), Postives = 111/139 (79.86%), Query Frame = 1
Query:    1 EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICT 417
            E I+DLR LK +AGIE ED+AKRLMDYGFH PT+SWPVPGTLMIEPTESE+K ELDR+C+A+I+IR EIA+IE G +D   N LK APHP  +L  + W  PYSRE AAYPA WLR  KFWPA  R+DN YGDR+L+CT
Sbjct:  809 ECILDLRPLKKSAGIEVEDIAKRLMDYGFHAPTVSWPVPGTLMIEPTESETKAELDRFCEAMIAIRSEIAEIEAGVSDRQQNPLKNAPHPALMLATEPWPYPYSREVAAYPAPWLREYKFWPAVARIDNAYGDRHLVCT 947          
BLAST of GO242425 vs. ExPASy Swiss-Prot
Match: GCSP_NOSP7 (Glycine dehydrogenase [decarboxylating] OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gcvP PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.237e-52
Identity = 94/142 (66.20%), Postives = 111/142 (78.17%), Query Frame = 1
Query:    1 EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 426
            E I+DLR LK +A IE +DVAKRLMDYGFH PT+SWPV GT+M+EPTESESK+ELDR+CDALI+IR+EIA+IE GK D  +NVLK APH    L+   W  PYSRE AAYPA W R  KFWPA GR+D  +GDRN +C+ LP
Sbjct:  832 ECILDLRSLKKSAAIEIDDVAKRLMDYGFHAPTVSWPVGGTIMVEPTESESKQELDRFCDALIAIRQEIAEIEVGKVDAQDNVLKNAPHTAESLITGEWQHPYSREQAAYPAPWTREYKFWPAVGRIDAAFGDRNFVCSCLP 973          
The following BLAST results are available for this feature:
BLAST of GO242425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
GCSP_SOLTU5.694e-7389.44Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_PEA1.657e-7287.32Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP2_ARATH3.691e-7288.03Glycine dehydrogenase [decarboxylating] 2, mitocho... [more]
GCSP1_ARATH3.125e-7187.32Glycine dehydrogenase [decarboxylating] 1, mitocho... [more]
GCSPA_FLAPR1.111e-6885.21Glycine dehydrogenase [decarboxylating] A, mitocho... [more]
GCSP_FLAAN1.896e-6885.21Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSPB_FLAPR1.896e-6885.21Glycine dehydrogenase [decarboxylating] B, mitocho... [more]
GCSP_FLATR2.476e-6885.21Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_THEEB1.904e-5268.35Glycine dehydrogenase [decarboxylating] OS=Thermos... [more]
GCSP_NOSP77.237e-5266.20Glycine dehydrogenase [decarboxylating] OS=Nostoc ... [more]

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Properties
Property NameValue
Genbank description1073 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1235 5, mRNA sequence.