GO242380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242380 vs. ExPASy Swiss-Prot
Match: RM02_ORYSJ (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica GN=RPL2 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 2.955e-26 Identity = 60/93 (64.52%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 47 KEPTSRYCLVRLRCGNEKVIDPRCRATIGTVSNPSHGAKKLSKAGQRSWLGRRAVVRGVAMIPVDHPHVERSKSSGNNGRCSFTPWGKPCKSG 325 KEP S+ CLVRL G EK+ID RCRATIG VSNP+HGA+KL KAGQ W GRR +VRGVAM PVDHPH + GR S +PWGKP K+G Sbjct: 400 KEPASQ-CLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPH-GGGEGRTKGGRPSVSPWGKPTKAG 490
BLAST of GO242380 vs. ExPASy Swiss-Prot
Match: RM02_ORYSI (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica GN=RPL2 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 2.955e-26 Identity = 60/93 (64.52%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 47 KEPTSRYCLVRLRCGNEKVIDPRCRATIGTVSNPSHGAKKLSKAGQRSWLGRRAVVRGVAMIPVDHPHVERSKSSGNNGRCSFTPWGKPCKSG 325 KEP S+ CLVRL G EK+ID RCRATIG VSNP+HGA+KL KAGQ W GRR +VRGVAM PVDHPH + GR S +PWGKP K+G Sbjct: 400 KEPASQ-CLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPH-GGGEGRTKGGRPSVSPWGKPTKAG 490
BLAST of GO242380 vs. ExPASy Swiss-Prot
Match: RM02_ORYSA (60S ribosomal protein L2, mitochondrial OS=Oryza sativa GN=RPL2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.955e-26 Identity = 60/93 (64.52%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 47 KEPTSRYCLVRLRCGNEKVIDPRCRATIGTVSNPSHGAKKLSKAGQRSWLGRRAVVRGVAMIPVDHPHVERSKSSGNNGRCSFTPWGKPCKSG 325 KEP S+ CLVRL G EK+ID RCRATIG VSNP+HGA+KL KAGQ W GRR +VRGVAM PVDHPH + GR S +PWGKP K+G Sbjct: 400 KEPASQ-CLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPH-GGGEGRTKGGRPSVSPWGKPTKAG 490
BLAST of GO242380 vs. ExPASy Swiss-Prot
Match: RM02_MARPO (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha GN=RPL2 PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 6.162e-24 Identity = 56/106 (52.83%), Postives = 69/106 (65.09%), Query Frame = 2 Query: 35 QDFEKEPTSRYCLVRLRCGNEKVIDPRCRATIGTVSNPSHGAKKLSKAGQRSWLGRRAVVRGVAMIPVDHPHVERSKSSGNNGRCSFTPWGKPCKSGN*TASPKKK 352 Q +K + C+VRL G +K+ID RCRATIG VSN +HG +K +KAGQ WLGRR +VRGVAM PVDHPH + GR S +PWGKP K G T K++ Sbjct: 396 QIIQKVENTPQCIVRLPSGVDKLIDSRCRATIGIVSNLNHGKRKFNKAGQSRWLGRRPIVRGVAMNPVDHPH-GGGEGRTKGGRPSVSPWGKPTKGGFKTVVRKRR 500
BLAST of GO242380 vs. ExPASy Swiss-Prot
Match: RL2_BRASO (50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain ORS278) GN=rplB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.736e-18 Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 2 Query: 65 YCLVRLRCGNEKVIDPRCRATIGTVSNPSHGAKKLSKAGQRSWLGRRAVVRGVAMIPVDHPHVERSKSSGNNGRCSFTPWGKPCKSGN*TASPKKKEK 358 Y +VRL G ++++ RCR TIG VSNP H + KAG++ W+GRR RGVAM P+DHPH + + GR TPWGKP K G T + K +K Sbjct: 171 YVIVRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRRPHNRGVAMNPIDHPH-GGGEGRTSGGRHPVTPWGKPTK-GKKTRTNKSTDK 266
BLAST of GO242380 vs. ExPASy Swiss-Prot
Match: RL2_BRASB (50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.736e-18 Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 2 Query: 65 YCLVRLRCGNEKVIDPRCRATIGTVSNPSHGAKKLSKAGQRSWLGRRAVVRGVAMIPVDHPHVERSKSSGNNGRCSFTPWGKPCKSGN*TASPKKKEK 358 Y +VRL G ++++ RCR TIG VSNP H + KAG++ W+GRR RGVAM P+DHPH + + GR TPWGKP K G T + K +K Sbjct: 171 YVIVRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRRPHNRGVAMNPIDHPH-GGGEGRTSGGRHPVTPWGKPTK-GKKTRTNKSTDK 266
BLAST of GO242380 vs. ExPASy Swiss-Prot
Match: RL2_RHOPS (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.868e-18 Identity = 47/98 (47.96%), Postives = 59/98 (60.20%), Query Frame = 2 Query: 65 YCLVRLRCGNEKVIDPRCRATIGTVSNPSHGAKKLSKAGQRSWLGRRAVVRGVAMIPVDHPHVERSKSSGNNGRCSFTPWGKPCKSGN*TASPKKKEK 358 Y +VRL G ++++ RC ATIG VSNP H + KAG++ WLGRR RGV M P+DHPH + + GR TPWGKP K G T S K +K Sbjct: 171 YVIVRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRKRWLGRRPHNRGVVMNPIDHPH-GGGEGRTSGGRHPVTPWGKPTK-GKKTRSNKSTDK 266
BLAST of GO242380 vs. ExPASy Swiss-Prot
Match: RL2_BRAJA (50S ribosomal protein L2 OS=Bradyrhizobium japonicum GN=rplB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 8.618e-18 Identity = 45/98 (45.92%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 65 YCLVRLRCGNEKVIDPRCRATIGTVSNPSHGAKKLSKAGQRSWLGRRAVVRGVAMIPVDHPHVERSKSSGNNGRCSFTPWGKPCKSGN*TASPKKKEK 358 Y ++RL G ++++ RCR TIG VSNP H + KAG+ WLGR+ RGV+M P+DHPH + + GR TPWGKP K G T S K K Sbjct: 171 YVIIRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRNRWLGRKPHNRGVSMNPIDHPH-GGGEGRTSGGRHPVTPWGKPTK-GKKTRSNKSTNK 266
BLAST of GO242380 vs. ExPASy Swiss-Prot
Match: RL2_WOLWR (50S ribosomal protein L2 OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.126e-17 Identity = 51/102 (50.00%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 62 RYCLVRLRCGNEKVIDPRCRATIGTVSNPSHGAKKLSKAGQRSWLGRRAVVRGVAMIPVDHPH-VERSKSSGNNGRCSFTPWGKPCKSGN*TASPKKKEKSA 364 +Y L+RLR G ++I C+ATIG VSNP H +KL KAG+ WLG R VRGVAM PVDHPH K+SG GR TPWG K +K+ KS+ Sbjct: 170 QYVLLRLRSGQIRLILSSCKATIGVVSNPDHKNRKLGKAGRSRWLGIRPTVRGVAMNPVDHPHGGGEGKTSG--GRHPVTPWGVATKG----KKTRKRNKSS 265
BLAST of GO242380 vs. ExPASy Swiss-Prot
Match: RL2_WOLPM (50S ribosomal protein L2 OS=Wolbachia pipientis wMel GN=rplB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.920e-17 Identity = 49/100 (49.00%), Postives = 59/100 (59.00%), Query Frame = 2 Query: 62 RYCLVRLRCGNEKVIDPRCRATIGTVSNPSHGAKKLSKAGQRSWLGRRAVVRGVAMIPVDHPH-VERSKSSGNNGRCSFTPWGKPCKSGN*TASPKKKEK 358 +Y L+RLR G ++I C+ATIG VSNP H +KL KAG+ WLG R VRG+AM PVDHPH K+SG GR TPWG K K +K Sbjct: 170 QYVLLRLRSGQIRLILSSCKATIGVVSNPDHKNRKLGKAGRSRWLGIRPTVRGIAMNPVDHPHGGGEGKTSG--GRHPVTPWGVATKGKKTRRRNKSSDK 267 The following BLAST results are available for this feature:
BLAST of GO242380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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