GO242379

Overview
NameGO242379
Unique NameGO242379
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242379 vs. ExPASy Swiss-Prot
Match: IDND_VITVI (L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSVIVT00012394001 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 1.359e-52
Identity = 97/118 (82.20%), Postives = 110/118 (93.22%), Query Frame = 2
Query:    2 ESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAE 355
            E K  GSPP +G LANQVVHP++LCFKLPDNVSLEEGAMCEPLSVG+HACRRAN+GPETNVLIMGSGPIGLVTMLAARAFGAPRIV+VDVDD RL++AK LGAD+I++VSTN+QD+ E
Sbjct:  127 EMKFFGSPPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDE 244          
BLAST of GO242379 vs. ExPASy Swiss-Prot
Match: DHSO_BOVIN (Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 1.281e-26
Identity = 59/113 (52.21%), Postives = 83/113 (73.45%), Query Frame = 2
Query:   20 SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVST-NLQDIAE 355
            +PP  G L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ G+GPIGLV++LAA+A GA ++V+ D+   RLS AK++GAD I+++S  + Q+IA+
Sbjct:  121 TPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAK 233          
BLAST of GO242379 vs. ExPASy Swiss-Prot
Match: DHSO_SHEEP (Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.854e-26
Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 2
Query:   20 SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVS 331
            +PP  G L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ G+GPIGLV +LAA+A GA ++V+ D+   RLS AK++GAD I+++S
Sbjct:  119 TPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEIS 222          
BLAST of GO242379 vs. ExPASy Swiss-Prot
Match: DHSO_PONAB (Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.850e-25
Identity = 54/104 (51.92%), Postives = 74/104 (71.15%), Query Frame = 2
Query:   20 SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVS 331
            +PP  G L     H A  C+KLPDNV+ EEGAM EPLSVG+HACRR  +     VL+ G+GPIG+VT+L A+A GA ++V+ D+   RLS AK++GAD ++++S
Sbjct:  122 TPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQIS 225          
BLAST of GO242379 vs. ExPASy Swiss-Prot
Match: DHSO_HUMAN (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 4.121e-25
Identity = 53/104 (50.96%), Postives = 74/104 (71.15%), Query Frame = 2
Query:   20 SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVS 331
            +PP  G L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ G+GPIG+VT+L A+A GA ++V+ D+   RLS AK++GAD ++++S
Sbjct:  122 TPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQIS 225          
BLAST of GO242379 vs. ExPASy Swiss-Prot
Match: DHSO_RAT (Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4)

HSP 1 Score: 112.849 bits (281), Expect = 5.383e-25
Identity = 54/113 (47.79%), Postives = 80/113 (70.80%), Query Frame = 2
Query:   20 SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNL-QDIAE 355
            +PP  G L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ G+GPIG+VT+L A+A GA ++V++D+   RL+ AK++GAD  ++V+     DIA+
Sbjct:  122 TPPDDGNLCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVTLLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAK 234          
BLAST of GO242379 vs. ExPASy Swiss-Prot
Match: DHSO_MACFA (Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 2.045e-24
Identity = 52/104 (50.00%), Postives = 74/104 (71.15%), Query Frame = 2
Query:   20 SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVS 331
            +PP  G L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ G+GPIG+V++L A+A GA ++V+ D+   RLS AK++GAD ++++S
Sbjct:  122 TPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIGVVSLLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQIS 225          
BLAST of GO242379 vs. ExPASy Swiss-Prot
Match: DHSO_MOUSE (Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 2.671e-24
Identity = 53/112 (47.32%), Postives = 78/112 (69.64%), Query Frame = 2
Query:   20 SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNL-QDIA 352
            +PP  G L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ G+GP+G+VT+L A+A GA ++V+ D+   RL+ AK++GAD  ++V     Q+IA
Sbjct:  122 TPPDDGNLCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIA 233          
BLAST of GO242379 vs. ExPASy Swiss-Prot
Match: DHSO_BACSU (Sorbitol dehydrogenase OS=Bacillus subtilis GN=gutB PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 2.117e-21
Identity = 45/105 (42.86%), Postives = 67/105 (63.81%), Query Frame = 2
Query:   14 LGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKV 328
            L +PPV G     +    D  F +PD++S EE A+ EP SVG+HA  R  + P + + IMG GP+GL+ + AA+AFGA  I++ D++  RL  AKK+GA +I+ +
Sbjct:  120 LATPPVDGAFVQYIKMRQDFVFLIPDSLSYEEAALIEPFSVGIHAAARTKLQPGSTIAIMGMGPVGLMAVAAAKAFGAGTIIVTDLEPLRLEAAKKMGATHIINI 224          
BLAST of GO242379 vs. ExPASy Swiss-Prot
Match: DHSO_BOMMO (Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.764e-21
Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 2
Query:   14 LGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQD 346
            +G+P   G L     H AD C KLPDN+++EEGA  +PL++ +HAC RA I   + ++I+G+GPIG++  ++A+A GA +I++ DV   RL  A +LGADN++ V     D
Sbjct:  118 MGAP---GNLCRYYKHVADFCHKLPDNLTMEEGAAVQPLAIVIHACNRAKITLGSKIVILGAGPIGILCAMSAKAMGASKIILTDVVQSRLDAALELGADNVLLVRREYTD 225          
The following BLAST results are available for this feature:
BLAST of GO242379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
IDND_VITVI1.359e-5282.20L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSV... [more]
DHSO_BOVIN1.281e-2652.21Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 ... [more]
DHSO_SHEEP2.854e-2653.85Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 ... [more]
DHSO_PONAB1.850e-2551.92Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=... [more]
DHSO_HUMAN4.121e-2550.96Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
DHSO_RAT5.383e-2547.79Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sor... [more]
DHSO_MACFA2.045e-2450.00Sorbitol dehydrogenase OS=Macaca fascicularis GN=S... [more]
DHSO_MOUSE2.671e-2447.32Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=... [more]
DHSO_BACSU2.117e-2142.86Sorbitol dehydrogenase OS=Bacillus subtilis GN=gut... [more]
DHSO_BOMMO2.764e-2143.24Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank description1027 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1186 5, mRNA sequence.