GO242373

Overview
NameGO242373
Unique NameGO242373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242373 vs. ExPASy Swiss-Prot
Match: Y2162_ARATH (Uncharacterized protein At2g41620 OS=Arabidopsis thaliana GN=At2g41620 PE=2 SV=2)

HSP 1 Score: 331.257 bits (848), Expect = 6.141e-90
Identity = 188/339 (55.46%), Postives = 229/339 (67.55%), Query Frame = 2
Query:    2 SDGLAPYSLDDLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSIQVLPAVLYLSKESGDEGYNIDAAHISIVLADHGVLSEGSGAGKKLGLMDPYAEASSIIRQYGSAYLRLGNXXXXXXXXXXXXXXXXXXXXSWTGRANVDQQRQKSXXXXXXXXXXXXXXXXXXXXXXSRGAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLSEAIFAMSRGRLDGESQTASLIHSGNEILEMENIILK-SVFMNESSSGAQTVLRQLSNIVCHRWQSAL---FRCLRE-SQLHFFH-DPRV-RCHGDVFQ-LSPPVPACV 994
            +DGLAPYSLDDLQ YLNKF+PSYYTKNGKDPLVYPYVLLLS+Q+LPA+++LSKE+GD GYNIDA HI+I L DH VLSEGSG G KL +MD  AEASS+IRQYGS +L  G+                    +W+GR+NVDQQRQ++                      +RG+GEEG+LGR+  D + RQQFL+EAA QCQEAGLYDKSIELQKRVGAFS AL+TINKCLSEAI +++RGRLDGES+T+ LI +GN+ILE      + S+   E     +T+LR+L  I+       L      LRE ++L F H DPR+     DVFQ  SP    CV
Sbjct:  471 NDGLAPYSLDDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSVQLLPAIMHLSKEAGDGGYNIDAVHIAISLVDHSVLSEGSGTGHKLSVMDSNAEASSMIRQYGSMFLHHGDLQMTVEYYAQAAATVGGGQLAWSGRSNVDQQRQRNLMLKQLLTEILLRERGIYFLLGARGSGEEGQLGRFFPDSRLRQQFLVEAAHQCQEAGLYDKSIELQKRVGAFSAALETINKCLSEAICSLARGRLDGESRTSGLILAGNDILETYKYYPEVSLQERERVMEQETILRELEAILSIHKLGRLGNHLDALREIAKLPFLHLDPRMPDATADVFQSASPYFQTCV 809          
The following BLAST results are available for this feature:
BLAST of GO242373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2162_ARATH6.141e-9055.46Uncharacterized protein At2g41620 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank description1021 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1180 5, mRNA sequence.