GO242369

Overview
NameGO242369
Unique NameGO242369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242369 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.117e-21
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 1
Query:    1 VGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 144
            VGEGP AQCISGFTA D+PPPRGPLWILGDVFMGRYHTVFDFG+LRVG
Sbjct:  461 VGEGPVAQCISGFTAFDIPPPRGPLWILGDVFMGRYHTVFDFGKLRVG 508          
BLAST of GO242369 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.372e-20
Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 1
Query:    1 VGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 147
            VGEG  AQCISGFTAMD+PPPRGPLWILGDVFMG YHTVFD+G+LR+GF
Sbjct:  456 VGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGF 504          
BLAST of GO242369 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.372e-20
Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 1
Query:    1 VGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 147
            VGEG  AQCISGFTAMD+PPPRGPLWILGDVFMG YHTVFD+G++RVGF
Sbjct:  457 VGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYGKMRVGF 505          
BLAST of GO242369 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.517e-19
Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 1
Query:    1 VGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 147
            VGEG  AQCISGFTAMDV PP GPLWILGDVFMG+YHTVFD+G LRVGF
Sbjct:  421 VGEGATAQCISGFTAMDVAPPHGPLWILGDVFMGQYHTVFDYGNLRVGF 469          
BLAST of GO242369 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.678e-16
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 1
Query:    7 EGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 147
            +G +  CISGF A D+PPPRGPLWILGDVFMG YHTVFDFG+ R+GF
Sbjct:  446 QGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIGF 492          
BLAST of GO242369 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.173e-13
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 1
Query:    1 VGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 147
            V +  +  C+SGF  MD+PPP GPLWILGDVF+GRY+TVFD    RVGF
Sbjct:  358 VSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGF 406          
BLAST of GO242369 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.062e-13
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 1
Query:    1 VGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 147
            V +G +  C+SGF  MD+PPP GPLWILGDVF+G Y+TVFD    RVGF
Sbjct:  356 VSQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGSYYTVFDRDNNRVGF 404          
BLAST of GO242369 vs. ExPASy Swiss-Prot
Match: CATD_BOVIN (Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.064e-12
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 1
Query:    1 VGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 144
            V +     C+SGF  MD+PPP GPLWILGDVF+GRY+TVFD  + RVG
Sbjct:  336 VSQAETTVCLSGFMGMDIPPPGGPLWILGDVFIGRYYTVFDRDQNRVG 383          
BLAST of GO242369 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.064e-12
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 1
Query:   25 CISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 147
            C+SGF  +D+PPP GPLWILGDVF+G+Y+T FD G  RVGF
Sbjct:  343 CLSGFMGIDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGF 383          
BLAST of GO242369 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.226e-12
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = 1
Query:    1 VGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 144
            V +G +  C+SGF  MD+PPP GPLWILGDVF+G Y+TVFD  + RVG
Sbjct:  356 VSQGGKTICLSGFMGMDIPPPGGPLWILGDVFIGCYYTVFDRDQNRVG 403          
The following BLAST results are available for this feature:
BLAST of GO242369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ASPR_CUCPE2.117e-2191.67Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPR_HORVU1.372e-2085.71Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR1_ORYSJ1.372e-2085.71Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
CYPR1_CYNCA1.517e-1985.71Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPRX_ORYSJ2.678e-1674.47Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
CATD_HUMAN6.173e-1363.27Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_MOUSE8.062e-1363.27Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
CATD_BOVIN3.064e-1262.50Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2[more]
ASPP_AEDAE3.064e-1268.29Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATD_CANFA5.226e-1262.50Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]

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Properties
Property NameValue
Genbank description1017 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1175 5, mRNA sequence.