GO242301
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242301 vs. ExPASy Swiss-Prot
Match: TRPC_ARATH (Indole-3-glycerol phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=At2g04400 PE=2 SV=2) HSP 1 Score: 417.157 bits (1071), Expect = 8.013e-116 Identity = 215/316 (68.04%), Postives = 256/316 (81.01%), Query Frame = 2 Query: 5 MLINEVAASQGIKIRRRPPTGPPLHYAGPFQFRIQN-EGNTPRNILEEIVWHKDVEVSQLKQRRPLSMLKKALDNAPPSRDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLGGES-**ADDPGKGY-WTFGKDIS 943 M E+A SQGI+IRR+PP+ PL Y+GPF+ R+ N + ++PRNILEEI W+KDVEVS++K+ PL +LKKA+++APP+RDF+GAL A++RTG P LIAEVKKASPSRGIL+E+FDPVEIA++YEKGGAACLS+LTD+KYF+G FENLEA+RSAGVKCPLLCKEF+VD WQIYYARTKGADAVLLIAAVL DL+I ++ KICK L L ALVEVHDEREM RV TFEVD SNTKKLLEGE G IR++++IVVGESGLFTPDDIAYVQ AGVKAVL GES +DP KG FG++IS Sbjct: 85 MYQEELAISQGIRIRRKPPSKAPLGYSGPFELRLHNNDADSPRNILEEITWYKDVEVSRMKELNPLDVLKKAVEDAPPTRDFVGALRMAHKRTGFPGLIAEVKKASPSRGILKENFDPVEIAQAYEKGGAACLSVLTDQKYFQGGFENLEAIRSAGVKCPLLCKEFVVDPWQIYYARTKGADAVLLIAAVLADLEITFLLKICKKLSLAALVEVHDEREMGRVLGIEGIELVGINNRSLETFEVDISNTKKLLEGEHGRQIRERDMIVVGESGLFTPDDIAYVQAAGVKAVLVGESIVKQNDPEKGIAGLFGRNIS 400
BLAST of GO242301 vs. ExPASy Swiss-Prot
Match: TRPC_MICAN (Indole-3-glycerol phosphate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=trpC PE=3 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 3.188e-72 Identity = 151/284 (53.17%), Postives = 192/284 (67.61%), Query Frame = 2 Query: 38 IKIRRRPPTGPPLHYAGPFQFRIQNEGNTPRNILEEIVWHKDVEVSQLKQRRPLSMLKKALDNAPPSRDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLGGES 889 ++IRR+ P P + ++ P+NILEEIVWHK++EV +L++R PL L++ + N P DF+ AL + PALIAEVKKASPS+G++ EDFDPV IAR+YE+GGA CLS+LTD K+F+GS+ENL VR A V PLLCKEFI+ +QIYYAR+KGADAVLLIAA+L D D+ Y KI K LG+TALVEVH E DRV TF VD NT++LLE RGE +R+K I++V ESGL T D+A V++AG AVL GES Sbjct: 1 MQIRRKHPN--PAVKVESLSYVVKVPEAQPQNILEEIVWHKEIEVDKLRERLPLLELRQKIANTAPPCDFLAALKQGKTQ---PALIAEVKKASPSKGVILEDFDPVAIARTYEQGGATCLSVLTDSKFFQGSYENLTLVRQA-VSLPLLCKEFILYPYQIYYARSKGADAVLLIAAILSDQDLAYFVKIVKGLGMTALVEVHSLAEFDRVLAIEGIELIGINNRNLETFTVDLDNTRQLLEA-RGEQVREKGILIVSESGLHTATDLAKVKQAGANAVLIGES 277
BLAST of GO242301 vs. ExPASy Swiss-Prot
Match: TRPC_CYAP8 (Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain PCC 8801) GN=trpC PE=3 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 4.603e-71 Identity = 147/284 (51.76%), Postives = 193/284 (67.96%), Query Frame = 2 Query: 38 IKIRRRPPTGPPLHYAGPFQFRIQNEGNTPRNILEEIVWHKDVEVSQLKQRRPLSMLKKALDNAPPSRDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLGGES 889 ++IRRR P PP+ +++++ PR+ILEEIVWHK+ EV +L++ PL L+K + + PP +DF+GA+ + PALIAEVKKASPS+G++REDFDPV IA++Y KGGA+CLS+LTD K+F+GSFENL VR + V PLLCKEFI+ +QIY ARTKGADAVLLIAA+L D D+ Y KI + LG+TAL+EVH E+DRV TFEVD T +LL R + I+ I ++ ESGL TPDD+ +VQ+AG VL GES Sbjct: 1 MQIRRRSPN-PPVE-VDTLRYQVKVPDGEPRHILEEIVWHKEKEVDRLRESLPLLELRKQVQHLPPPQDFLGAITQGKTQ---PALIAEVKKASPSKGVIREDFDPVAIAQAYVKGGASCLSVLTDAKFFQGSFENLALVRQS-VDLPLLCKEFILYPYQIYLARTKGADAVLLIAAILSDRDLSYFLKIIQTLGMTALIEVHSLTELDRVLAIEGVSLIGINNRNLETFEVDLKTTSQLLAARRDK-IQALGIKIISESGLHTPDDLQFVQQAGSDGVLIGES 277
BLAST of GO242301 vs. ExPASy Swiss-Prot
Match: TRPC_CYAP4 (Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=trpC PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 6.647e-70 Identity = 148/284 (52.11%), Postives = 190/284 (66.90%), Query Frame = 2 Query: 38 IKIRRRPPTGPPLHYAGPFQFRIQNEGNTPRNILEEIVWHKDVEVSQLKQRRPLSMLKKALDNAPPSRDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLGGES 889 ++IRRRP P+ +F+++ TPRNILEEIVWHK+VEV Q+++R PL L+K + APP RDF+ AL A + PALIAEVKKASPS+G+LRE+FDPV IA++Y GAACLS+LTDEK+F+GSF L +R A V PLLCKEFI+ +Q+Y AR++GADAVLLIAA+L D D++Y KI LG+ AL+EVH E+DRV F VD T LL +R + + Q+NI+VV ESGL+ D+ VQ AG KAVL GES Sbjct: 1 MQIRRRPN---PVVAVQELRFQVKAPDATPRNILEEIVWHKEVEVEQMRERAPLLELRKQVQTAPPPRDFVAALRQAQYQ---PALIAEVKKASPSKGVLREEFDPVAIAQAYATAGAACLSVLTDEKFFQGSFTYLNQIRQA-VHLPLLCKEFIIYPYQMYLARSQGADAVLLIAAILSDQDLQYFLKIATSLGMAALIEVHTLTELDRVLNLEGVSLVGINNRNLENFTVDLQTTCDLL-SKRWDQLDQRNILVVSESGLYQAVDLQQVQTAGAKAVLIGES 276
BLAST of GO242301 vs. ExPASy Swiss-Prot
Match: TRPC_SYNY3 (Indole-3-glycerol phosphate synthase OS=Synechocystis sp. (strain PCC 6803) GN=trpC PE=3 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 5.627e-69 Identity = 148/284 (52.11%), Postives = 195/284 (68.66%), Query Frame = 2 Query: 38 IKIRRRPPTGPPLHYAGPFQFRIQNEGNTPRNILEEIVWHKDVEVSQLKQRRPLSMLKKALDNAPPSRDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLGGES 889 ++IRRRPP PP+ Q++I++ PR+ILEEIVWHK+ EV+Q ++ PL L+ + + P DF+GAL + ++ PALIAEVKKASPS+GI+R DFDPV IA++YE GGA CLS+LTDEK+F+GSFENL+ VRSA V+ PLLCKEFI+ +QIY AR++GADAVLLIAA+L D D+RY KI + LG+ ALVEVH EMDRV TF VD T+ L +R E + Q +I +V ESG++ D+ +Q+AG +AVL GES Sbjct: 1 MEIRRRPPN-PPIK-VDILQYQIKHPEAAPRHILEEIVWHKEKEVAQRRELVPLVKLQSLVKDMTPPLDFVGALRQSPRQ---PALIAEVKKASPSKGIIRADFDPVAIAKAYEAGGANCLSVLTDEKFFQGSFENLQLVRSA-VQLPLLCKEFIIYPYQIYLARSRGADAVLLIAAILSDKDLRYFLKIIEGLGMAALVEVHTLEEMDRVLALDGVQLIGVNNRNLQTFTVDLQTTEDLF-AQRREQLTQGDITLVSESGIYELADLQRLQQAGARAVLVGES 277
BLAST of GO242301 vs. ExPASy Swiss-Prot
Match: TRPC_CYAA5 (Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=trpC PE=3 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 1.532e-66 Identity = 139/284 (48.94%), Postives = 187/284 (65.85%), Query Frame = 2 Query: 38 IKIRRRPPTGPPLHYAGPFQFRIQNEGNTPRNILEEIVWHKDVEVSQLKQRRPLSMLKKALDNAPPSRDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLGGES 889 ++IRRRPP P ++++ + +ILEEIVWHK+ EV +++ R L L+K +APP++DF+GA+ +Q PALIAEVKKASPS+G++REDF+PV IA++Y +GGA+CLS+LTD K+F+GSF+NL VR A V PLLCKEFI+ +QIY AR KGADA+LLIAA+L D D++Y+ KI LG+T LVEVH E+DRV TFEV T L+ + E I+++ I +V ESG+ TP + V EAG AVL GES Sbjct: 1 MQIRRRPPN--PAVEVDILRYQVPDPNGKANHILEEIVWHKEKEVERMRDRLSLLDLRKQEQSAPPAKDFLGAI---SQGKTQPALIAEVKKASPSKGVIREDFEPVAIAQAYVQGGASCLSVLTDSKFFQGSFDNLALVRQA-VDIPLLCKEFIIYPYQIYLARVKGADAILLIAAILKDSDLQYLIKIIHGLGMTPLVEVHSLAELDRVLAIEGVSLVGINNRNLETFEVSLETTTNLITARQDE-IKERGIYIVSESGIHTPQHLQQVTEAGANAVLIGES 277
BLAST of GO242301 vs. ExPASy Swiss-Prot
Match: TRPC_SYNSC (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain CC9605) GN=trpC PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 5.823e-66 Identity = 135/284 (47.54%), Postives = 188/284 (66.20%), Query Frame = 2 Query: 38 IKIRRRPPTGPPLHYAGPFQFRIQNEGNTPRNILEEIVWHKDVEVSQLKQRRPLSMLKKALDNAPPSRDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLGGES 889 ++IRRRPP P ++ + ++ PR+ILE+IVW KD E+ + + PL LK+ + PP++DF+GAL AA + PA+IAEVKKASPS+G++REDFDPV IA++Y GGA+CLS+LTD+ +F+G F+ L VR A V PLLCKEF++ +Q++ AR GADAVLLIAA+L D D+RY+ K LGLT LVEVHD EMDRV +FE D + T++LL + + ++Q+ +++V ESGLF+ D+ VQ AG AVL GE+ Sbjct: 1 MEIRRRPPN--PKVRVAHLEYAVPHDDEEPRHILEKIVWEKDREIDAARDKVPLDNLKQQIAKLPPTKDFLGALQAAATK---PAVIAEVKKASPSKGVIREDFDPVAIAKAYASGGASCLSVLTDKTFFQGGFDVLVEVRQA-VDLPLLCKEFVLSPYQLFQARAAGADAVLLIAAILSDQDLRYLNKAAAALGLTVLVEVHDATEMDRVLSIGGFPLIGINNRDLTSFETDLATTERLLV-DFNDRLKQQGVLLVSESGLFSRADLDRVQAAGAGAVLVGEA 277
BLAST of GO242301 vs. ExPASy Swiss-Prot
Match: TRPC_SYNS3 (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain CC9311) GN=trpC PE=3 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 4.929e-65 Identity = 135/284 (47.54%), Postives = 185/284 (65.14%), Query Frame = 2 Query: 38 IKIRRRPPTGPPLHYAGPFQFRIQNEGNTPRNILEEIVWHKDVEVSQLKQRRPLSMLKKALDNAPPSRDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLGGES 889 ++IRRRPP P ++ + ++ + PRNILE+IVW KD E++ ++R PL L++ + + PP+RDF+GAL AA R PA+IAEVKKASPS+G++REDFDPV IA++Y GGA+CLS+LTD+ +F+G F L VR A V PLLCK+FI+ +Q+Y AR GADA LLIAA+L D D+ Y K+ LGLT LVEVHD E+ RV +FE D + T + L + E + ++ I++V ESGLF D+ VQ AG +AVL GE+ Sbjct: 1 MEIRRRPPN--PKVQVAHLEYAVPDQDSEPRNILEKIVWEKDREIAVARERMPLEQLRRKVADLPPARDFLGALSAAAVR---PAVIAEVKKASPSKGVIREDFDPVAIAKAYASGGASCLSVLTDKAFFQGGFNVLIEVREA-VDLPLLCKDFILSPYQLYQARAAGADAALLIAAILTDQDLAYFAKVAAALGLTVLVEVHDAEELQRVLALGGFPLIGINNRDLTSFETDLATT-ETLTAQFAEQLLEQQILLVSESGLFHRADLDRVQAAGAQAVLVGEA 277
BLAST of GO242301 vs. ExPASy Swiss-Prot
Match: TRPC_PROM4 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=trpC PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 6.438e-65 Identity = 137/284 (48.24%), Postives = 183/284 (64.44%), Query Frame = 2 Query: 38 IKIRRRPPTGPPLHYAGPFQFRIQNEGNTPRNILEEIVWHKDVEVSQLKQRRPLSMLKKALDNAPPSRDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLGGES 889 ++IRRRPP P ++ I +E PRNILE+I+W KD EV ++R PLS LK ++N P ++DF+GAL Q + PA+IAE+KKASPS+G++RE+FDP+EIA +Y+ GGA CLS+LTD+ +F+G FE L VR V PLLCKEFI+ +QIY AR GADAVLLIAA+L D D+ Y+ K+ LGLT LVEVHD E+ RV TF D TK++++ E + I ++ +++V ESGLF D+ V G KAVL GES Sbjct: 1 MEIRRRPPN--PKVKVANLEYAIPHEDGEPRNILEKILWEKDREVKVSRERVPLSELKAQINNLPQTKDFLGAL---RQSSTSPAVIAEIKKASPSKGVIRENFDPIEIALAYKLGGATCLSVLTDKSFFQGGFEVLVQVRKT-VDLPLLCKEFIIQPYQIYQARVAGADAVLLIAAILSDQDLLYLRKVAISLGLTILVEVHDSNELKRVLDLEGFPLVGINNRDLKTFNTDLRTTKEVVK-EHKKRISEQEVLLVSESGLFNSADLEEVSSYGAKAVLVGES 277
BLAST of GO242301 vs. ExPASy Swiss-Prot
Match: TRPC_SYNR3 (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain RCC307) GN=trpC PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 1.098e-64 Identity = 135/284 (47.54%), Postives = 184/284 (64.79%), Query Frame = 2 Query: 38 IKIRRRPPTGPPLHYAGPFQFRIQNEGNTPRNILEEIVWHKDVEVSQLKQRRPLSMLKKALDNAPPSRDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLGGES 889 ++IRRRPP P ++ + ++ PR+ILEEIVW KD EV+Q ++R PL LK + P RDF+ AL A+ ++ PA+IAEVKKASPS+G++REDFDP IA++Y +GGA+CLS+LTD+++F+G FE L VR V PLLCKEFI+ +Q+Y AR GADAVLLIAA+L D DI Y+ K+ + LGL L+EVHD E++R +F+ D + T + L GE +RQ ++V ESGLF+ DD+ VQ AG AVL GE+ Sbjct: 1 MEIRRRPPN--PKVRVAHLEYAVPHDDEAPRHILEEIVWEKDREVAQARERVPLEKLKSQVAALPAPRDFVAALKASCRK---PAVIAEVKKASPSKGVIREDFDPEAIAKAYAEGGASCLSVLTDKRFFQGGFEVLVQVRQV-VDLPLLCKEFILSPYQLYQARAAGADAVLLIAAILTDQDISYLLKVARSLGLQVLLEVHDAAELERALGFEGVQLIGINNRDLTSFDTDLATT-ETLTATYGEQLRQSGALLVSESGLFSRDDLDRVQSAGADAVLVGEA 277 The following BLAST results are available for this feature:
BLAST of GO242301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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