GO242241

Overview
NameGO242241
Unique NameGO242241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
GO242241_ssr746 microsatellite GO242241_ssr746:746..757. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of GO242241 vs. ExPASy Swiss-Prot
Match: CALR_NICPL (Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 PE=2 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 2.514e-101
Identity = 169/210 (80.48%), Postives = 180/210 (85.71%), Query Frame = 2
Query:    2 TKKVHAILTYNGTNKLIKKEVPCETDQPTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEETWGK 631
            TKKVHAILTYN TN LIKKEVPCETDQ THVYTFILRPDATYSILIDN EKQSGSLYSDWDLLPPKTIKDP AKKPEDWD+KE+I DPEDKKPEGYDDIP+EI                     PTIPNPEYKGPWKPKKIKNPNYKGKWKAP+IDNPDFKDDPDLYV+P LKYVG+ELWQVKSGT+FDN+++ DDPEYAK +AEETWGK
Sbjct:  149 TKKVHAILTYNDTNHLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPSAKKPEDWDEKEFIDDPEDKKPEGYDDIPEEITDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKPKKIKNPNYKGKWKAPLIDNPDFKDDPDLYVFPKLKYVGVELWQVKSGTLFDNIVICDDPEYAKAIAEETWGK 358          
BLAST of GO242241 vs. ExPASy Swiss-Prot
Match: CALR_RICCO (Calreticulin OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 7.313e-101
Identity = 168/211 (79.62%), Postives = 181/211 (85.78%), Query Frame = 2
Query:    2 TKKVHAILTYNGTNKLIKKEVPCETDQPTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEETWGKH 634
            TKKVHAIL YN TN LIKKEVPCETDQ THVYT ++RPDATYSILIDN EKQ+GSLY+DWDLLPPK IKDP+AKKPEDWD+KEYIPDPEDKKPEGYDDIPKEI                     PTI NPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDP++YVYPNLKYVGIELWQVKSGT+FDNVL+ +DPEYAK+LAEETWGK+
Sbjct:  142 TKKVHAILNYNDTNHLIKKEVPCETDQLTHVYTLVIRPDATYSILIDNVEKQTGSLYTDWDLLPPKKIKDPEAKKPEDWDEKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDWDDEEDGEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPEIYVYPNLKYVGIELWQVKSGTLFDNVLICNDPEYAKQLAEETWGKN 352          
BLAST of GO242241 vs. ExPASy Swiss-Prot
Match: CALR1_ARATH (Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=1 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 1.629e-100
Identity = 170/211 (80.57%), Postives = 178/211 (84.36%), Query Frame = 2
Query:    2 TKKVHAILTYNGTNKLIKKEVPCETDQPTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEETWGKH 634
            TKKVHAILTYNGTN LIKKEVPCETDQ THVYTF+LRPDATYSILIDN EKQ+GSLYSDWDLLP K IKDP AKKPEDWDDKEYIPDPED KP GYDDIPKEI                     PTIPNPEY G WKPKKIKNP YKGKWKAPMIDNP+FKDDP+LYV+P LKYVG+ELWQVKSG++FDNVLVSDDPEYAKKLAEETWGKH
Sbjct:  144 TKKVHAILTYNGTNHLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWDLLPAKKIKDPSAKKPEDWDDKEYIPDPEDTKPAGYDDIPKEIPDTDAKKPEDWDDEEDGEWTAPTIPNPEYNGEWKPKKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPEYAKKLAEETWGKH 354          
BLAST of GO242241 vs. ExPASy Swiss-Prot
Match: CALR_PRUAR (Calreticulin OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.801e-99
Identity = 165/210 (78.57%), Postives = 181/210 (86.19%), Query Frame = 2
Query:    2 TKKVHAILTYNGTNKLIKKEVPCETDQPTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEETWGK 631
            TKKVHAIL YN TN LIKK+VPCETDQ THVYTFI+RPDATYSILIDN EKQ+GSLYSDWDLLP K IKDP+AKKPEDW+D+EYIPDPEDKKPEGYDDIPKEI                     PTIPNPEYKG WKPKKIKNPN+KGKWKAP+IDNP+FKDDP+LYVYPNLKYVGIELWQVKSGT+FDN+L++D+PEYAK+LAEETWGK
Sbjct:  146 TKKVHAILNYNNTNNLIKKDVPCETDQLTHVYTFIIRPDATYSILIDNLEKQTGSLYSDWDLLPAKKIKDPEAKKPEDWEDQEYIPDPEDKKPEGYDDIPKEITDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGEWKPKKIKNPNFKGKWKAPLIDNPEFKDDPELYVYPNLKYVGIELWQVKSGTLFDNILITDEPEYAKQLAEETWGK 355          
BLAST of GO242241 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 4.013e-99
Identity = 166/211 (78.67%), Postives = 180/211 (85.31%), Query Frame = 2
Query:    2 TKKVHAILTYNGTNKLIKKEVPCETDQPTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEETWGKH 634
            TKKVHAILT   TN LIKK+VPCETDQ THVYTFILRPDA+YSILIDN EKQSGS+Y+DWD+LPPK IKDP+AKKPEDW+DKEYIPDPEDKKPEGYDDIPKEI                     PTIPNP+YKG WKPKKIKNPN+KGKWKAPMIDNPDFKDDPD+YV+P LKYVGIELWQVKSGTMFDNVL+ DDP+YAKKLAEETWGK+
Sbjct:  144 TKKVHAILTKGETNHLIKKDVPCETDQLTHVYTFILRPDASYSILIDNVEKQSGSVYTDWDILPPKQIKDPEAKKPEDWEDKEYIPDPEDKKPEGYDDIPKEITDPEAKKPEDWDDEEDGEWTAPTIPNPDYKGEWKPKKIKNPNFKGKWKAPMIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTMFDNVLICDDPDYAKKLAEETWGKN 354          
BLAST of GO242241 vs. ExPASy Swiss-Prot
Match: CALR_BETVU (Calreticulin OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 1.525e-98
Identity = 166/210 (79.05%), Postives = 177/210 (84.29%), Query Frame = 2
Query:    2 TKKVHAILTYNGTNKLIKKEVPCETDQPTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEETWGK 631
            TKKVHAI  YN TN LIKK+VPCETDQ THVYTFILRPDATYSILIDN EKQ+GSLY+DWDLLP K IKDP+AKKPEDWDDKE+IPDPEDKKPEGYDDIP EI                     PTIPNPEYKGPWK KKIKNPNYKGKWKAPMIDNP+FKDDP+LYVYP L+YVG+ELWQVKSGT+FDNVLV DDPEYAK+LAEETWGK
Sbjct:  147 TKKVHAIFNYNDTNHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNQEKQTGSLYTDWDLLPAKKIKDPEAKKPEDWDDKEFIPDPEDKKPEGYDDIPAEITDPEAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKAKKIKNPNYKGKWKAPMIDNPEFKDDPELYVYPKLRYVGVELWQVKSGTLFDNVLVCDDPEYAKQLAEETWGK 356          
BLAST of GO242241 vs. ExPASy Swiss-Prot
Match: CALR2_ARATH (Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=1 SV=3)

HSP 1 Score: 352.829 bits (904), Expect = 1.864e-96
Identity = 161/210 (76.67%), Postives = 177/210 (84.29%), Query Frame = 2
Query:    2 TKKVHAILTYNGTNKLIKKEVPCETDQPTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEETWGK 631
            TKKVHAILTYN  N LIKK+VPCETDQ THVYTFILRPDATYSILIDN EKQ+GSLYSDWDLLPPK IKDP AKKPEDWD++EYI DPEDKKP+GYDDIPKEI                     PTIPNPEY G WKPK+IKNPNYKGKW+AP+IDNPDFKDDP+LYV+P LKYVG+ELWQVKSG++FDNVL+ DDP+YAKKLA+ETWGK
Sbjct:  144 TKKVHAILTYNEANHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKKIKDPSAKKPEDWDEQEYISDPEDKKPDGYDDIPKEIPDTDSKKPEDWDDEEDGEWTAPTIPNPEYMGEWKPKQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPDYAKKLADETWGK 353          
BLAST of GO242241 vs. ExPASy Swiss-Prot
Match: CALR_MAIZE (Calreticulin OS=Zea mays GN=CRT PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 2.519e-93
Identity = 154/211 (72.99%), Postives = 172/211 (81.52%), Query Frame = 2
Query:    2 TKKVHAILTYNGTNKLIKKEVPCETDQPTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEETWGKH 634
            TKKVH ILT +G N LIKK+VPC+TDQ THVYTFI+RPDATYSILIDN EK +GS+Y  WD+LPPK IKDP+AKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI                     PTIPNPEYKGPWK KKIKNPNY+GKWKAPMIDNPDFKDDP +Y + +LKY+GIELWQVKSGT+FDN++++DDP  AK  AEETWGKH
Sbjct:  147 TKKVHTILTKDGKNHLIKKDVPCQTDQLTHVYTFIIRPDATYSILIDNEEKHTGSIYEHWDILPPKKIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKTFAEETWGKH 357          
BLAST of GO242241 vs. ExPASy Swiss-Prot
Match: CALR_ORYSJ (Calreticulin OS=Oryza sativa subsp. japonica GN=Os07g0246200 PE=1 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 2.133e-92
Identity = 154/211 (72.99%), Postives = 169/211 (80.09%), Query Frame = 2
Query:    2 TKKVHAILTYNGTNKLIKKEVPCETDQPTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEETWGKH 634
            TKKVH I T N  N LIKK+VPCETDQ +HVYT I+ PDATY+ILIDN EKQSGS+Y  WD+LPPK IKDP+AKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI                     PTIPNPEYKGPWK KKIKNPNY+GKWKAPMIDNPDFKDDP +Y + +LKY+GIELWQVKSGT+FDN L++DDPE AK  AEETWGKH
Sbjct:  151 TKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPPKQIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNFLITDDPELAKTFAEETWGKH 361          
BLAST of GO242241 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.536e-74
Identity = 131/211 (62.09%), Postives = 151/211 (71.56%), Query Frame = 2
Query:    2 TKKVHAILTYNGTNKLIKKEVPCETDQPTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEETWGKH 634
            T+KVH ILTY G N LIKK++  ETDQ THVYT +++PD TY +LID  E  SGSLY DWD+LPPKTIKDP A KPEDWD++E I DPEDKKPEG+DDIP  I                     P IPNPEYKG WK K IKNP YKG W AP IDNPD+  D  LY + +LK+VG ELWQVKSG++FDN+LV+DD E AKK AE+TWGKH
Sbjct:  144 TRKVHVILTYKGKNYLIKKDIKAETDQLTHVYTLVIKPDNTYQVLIDLKEVASGSLYEDWDMLPPKTIKDPKASKPEDWDEREEIADPEDKKPEGWDDIPATIADKDAKKPEDWDDEEDGTWEPPMIPNPEYKGEWKAKMIKNPAYKGIWVAPDIDNPDYVHDDKLYNFKDLKFVGFELWQVKSGSIFDNILVTDDLEAAKKFAEDTWGKH 354          
The following BLAST results are available for this feature:
BLAST of GO242241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
CALR_NICPL2.514e-10180.48Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 ... [more]
CALR_RICCO7.313e-10179.62Calreticulin OS=Ricinus communis PE=2 SV=1[more]
CALR1_ARATH1.629e-10080.57Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=... [more]
CALR_PRUAR1.801e-9978.57Calreticulin OS=Prunus armeniaca PE=2 SV=1[more]
CALR_BERST4.013e-9978.67Calreticulin OS=Berberis stolonifera PE=2 SV=1[more]
CALR_BETVU1.525e-9879.05Calreticulin OS=Beta vulgaris PE=2 SV=1[more]
CALR2_ARATH1.864e-9676.67Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=... [more]
CALR_MAIZE2.519e-9372.99Calreticulin OS=Zea mays GN=CRT PE=2 SV=1[more]
CALR_ORYSJ2.133e-9272.99Calreticulin OS=Oryza sativa subsp. japonica GN=Os... [more]
CALR_CHLRE1.536e-7462.09Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=... [more]

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Properties
Property NameValue
Genbank description889 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1037 5, mRNA sequence.