GO242196

Overview
NameGO242196
Unique NameGO242196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242196 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.669e-18
Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 1
Query:  139 NGQKTWCVAKPSSDQAALLANINYACSQIDCRILQKGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPSYSKCVY 402
            +G   WCVAK  ++   L  NINYAC  +DC+ +Q G  CF P++L  HAS  MN YYQA G     CDF+ + ++ ++DPSY  C Y
Sbjct:  372 SGGGKWCVAKDGANGTDLQNNINYACGFVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKY 459          
BLAST of GO242196 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.563e-15
Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = 1
Query:  136 VNGQKTWCVAKPSSDQAALLANINYACSQ--IDCRILQKGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPSYSKCVYS 405
            +NG   +CVAK  +D   L+  +N+AC Q   +C  +Q G PC+ P+++ +HAS + N YYQ        CDF  +A+  T DPSY  C Y+
Sbjct:  356 LNGSSMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAYT 447          
BLAST of GO242196 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 8.571e-15
Identity = 33/84 (39.29%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  154 WCVAKPSSDQAALLANINYACSQ-IDCRILQKGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPSYSKCVY 402
            WCV K  +    L A++++AC   IDC  +Q G  CF P+N+++HA+ +MN+Y+Q   +   +CDF  +A + + +PSY+ CVY
Sbjct:  364 WCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVY 447          
BLAST of GO242196 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.462e-14
Identity = 34/87 (39.08%), Postives = 54/87 (62.07%), Query Frame = 1
Query:  148 KTWCVAKPSSDQAALLANINYACS--QIDCRILQKGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPSYSKCVY 402
            +T+C+A    D   L A +++AC   + +C  +Q G  C+ P+N+  HAS + N YYQ +GR   +CDF+  A+I TTDPS+  C++
Sbjct:  270 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIF 356          
BLAST of GO242196 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.462e-14
Identity = 33/89 (37.08%), Postives = 50/89 (56.18%), Query Frame = 1
Query:  142 GQKTWCVAKPSSDQAALLANINYACS--QIDCRILQKGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPSYSKCVY 402
            G K WC+A   +    L   +++AC    +DC  +Q   PCF PD +++HAS + N YYQ  G +  +C F  +++ V  DPSY  C+Y
Sbjct:  387 GTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLY 475          
BLAST of GO242196 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.257e-14
Identity = 33/87 (37.93%), Postives = 55/87 (63.22%), Query Frame = 1
Query:  148 KTWCVAKPSSDQAALLANINYACS--QIDCRILQKGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPSYSKCVY 402
            +T+C+AK   D+  L A +++AC   ++DC  L +G  C+ PD+++ H++ + N YYQ  G+   +CDF+  A + TTDPS   CV+
Sbjct:  358 QTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVF 444          
BLAST of GO242196 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.703e-13
Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = 1
Query:  148 KTWCVAKPSSDQAALLANINYACS--QIDCRILQKGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPSYSKCVYS 405
            +T+C A+  +D   L A +++AC   +IDC  +++G  C+ PDN++ HA+ + + YY   G N   C+F   A I TTDPS+  CV++
Sbjct:  366 QTYCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVFA 453          
BLAST of GO242196 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.048e-12
Identity = 31/86 (36.05%), Postives = 46/86 (53.49%), Query Frame = 1
Query:  151 TWCVAKPSSDQAALLANINYACS--QIDCRILQKGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPSYSKCVY 402
            +WC+A   + +  L   +++AC    +DC  +Q   PCF PD L++HAS   N Y+Q        C F  + + V  DPSY KC+Y
Sbjct:  368 SWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIY 453          
BLAST of GO242196 vs. ExPASy Swiss-Prot
Match: E13L3_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 3 OS=Arabidopsis thaliana GN=At5g08000 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.869e-12
Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = 1
Query:  151 TWCVAKPSSDQAALLANINYACSQ-IDCRILQKGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPSYSKCVY 402
            +WCV K     + L   ++YAC    DC        CF PDN+  H + ++N ++Q KG+   +C+F  +A + TTDPSY+ C +
Sbjct:   20 SWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVRAHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAF 104          
BLAST of GO242196 vs. ExPASy Swiss-Prot
Match: E13L2_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 2 OS=Arabidopsis thaliana GN=At5g61130 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11
Identity = 29/85 (34.12%), Postives = 48/85 (56.47%), Query Frame = 1
Query:  151 TWCVAKPSSDQAALLANINYACSQ-IDCRILQKGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPSYSKCVY 402
            +WCV K       L A ++YAC    DC   +    CF PDN+ +H + ++N ++Q KG++  +C+F  +A    +DPSY+ C +
Sbjct:   20 SWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAF 104          
The following BLAST results are available for this feature:
BLAST of GO242196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
E13B_WHEAT1.669e-1845.45Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E134_ARATH6.563e-1539.13Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E137_ARATH8.571e-1539.29Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E131_ARATH1.462e-1439.08Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E1312_ARATH1.462e-1437.08Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E133_ARATH3.257e-1437.93Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E132_ARATH4.703e-1337.50Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E1313_ARATH1.048e-1236.05Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E13L3_ARATH8.869e-1235.29Glucan endo-1,3-beta-glucosidase-like protein 3 OS... [more]
E13L2_ARATH1.513e-1134.12Glucan endo-1,3-beta-glucosidase-like protein 2 OS... [more]
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Properties
Property NameValue
Genbank description844 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 991 5, mRNA sequence.