GO242156

Overview
NameGO242156
Unique NameGO242156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7606 contig Csv1_Contig7606:981..1530. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: GOX2_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 OS=Arabidopsis thaliana GN=At3g14420 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.913e-54
Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 372
            AAGIIVSNHGARQLDYVPATI ALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV+SLAAEGE GVR+VL+MLR EFEL MALSGCRSLKEI+R+HI TEWD   PRP  RL
Sbjct:  246 AAGIIVSNHGARQLDYVPATISALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEISRNHITTEWDT--PRPSARL 367          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: GOX1_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 OS=Arabidopsis thaliana GN=At3g14415 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.970e-54
Identity = 107/124 (86.29%), Postives = 115/124 (92.74%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 372
            AAGIIVSNHGARQLDYVPATI ALEEVVKATQGR+PVFLDGGVRRGTDVFKALALGASGIFIGRPVV++LAAEGE GV++VL+MLR EFEL MALSGCRSL EITR+HIVTEWD   PR +PRL
Sbjct:  246 AAGIIVSNHGARQLDYVPATISALEEVVKATQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSGCRSLSEITRNHIVTEWDT--PRHLPRL 367          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: GOX_SPIOL (Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.727e-52
Identity = 102/124 (82.26%), Postives = 111/124 (89.52%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 372
            AAGIIVSNHGARQLDYVPATIMALEEVVKA QGRIPVFLDGGVRRGTDVFKALALGA+G+FIGRPVV+SLAAEGE GV++VL+M+R EFEL MALSGCRSLKEI+R HI  +WD    R V RL
Sbjct:  246 AAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWDGPSSRAVARL 369          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: HAOX1_HUMAN (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.712e-34
Identity = 69/104 (66.35%), Postives = 88/104 (84.62%), Query Frame = 1
Query:    7 GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITR 318
            GI+VSNHGARQLD VPATI  L E+V+A +G++ VFLDGGVR+GTDV KALALGA  +F+GRP+V+ LA +GEKGV+ VLE+L+ EF LAMALSGC+++K I +
Sbjct:  254 GILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDK 357          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: HAOX1_MOUSE (Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 7.461e-34
Identity = 68/104 (65.38%), Postives = 88/104 (84.62%), Query Frame = 1
Query:    7 GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITR 318
            GI+VSNHGARQLD VPATI  L E+V+A +G++ VFLDGGVR+GTDV KALALGA  +F+GRP+++ LA +GEKGV+ VLE+L+ EF LAMALSGC+++K I +
Sbjct:  254 GILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDK 357          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: HAOX2_BOVIN (Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 5.911e-31
Identity = 64/107 (59.81%), Postives = 84/107 (78.50%), Query Frame = 1
Query:    7 GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            GIIVSNHG RQLD VPA+I AL EVV A +G++ V+LDGG+R G DV KALALGA  +F+GRP+++ LA +GE GV+ VL++L+ EF  +M L+GCRS+ EI +D I
Sbjct:  242 GIIVSNHGGRQLDEVPASIDALTEVVAAVKGKVEVYLDGGIRTGNDVLKALALGAKCVFVGRPILWGLAYKGEHGVKEVLDILKNEFHTSMTLTGCRSVAEINQDLI 348          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.721e-31
Identity = 67/107 (62.62%), Postives = 82/107 (76.64%), Query Frame = 1
Query:    7 GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            GIIVSNHG RQLD VPA+I AL EVV A  G+I V++DGGVR G DV KALALGA  IF+GRP+++ LA +GE GV+ VL++L+ E    MALSGCRS+ EI+ D I
Sbjct:  242 GIIVSNHGGRQLDEVPASIDALREVVAAVNGKIEVYMDGGVRTGNDVLKALALGARCIFLGRPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEISPDLI 348          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: HAOX2_HUMAN (Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.536e-30
Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 1
Query:    7 GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRD 321
            GIIVSNHG RQLD V A+I AL EVV A +G+I V+LDGGVR G DV KALALGA  IF+GRP+++ LA +GE GV+ VL +L  EF  +MAL+GCRS+ EI R+
Sbjct:  240 GIIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 344          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 4.236e-29
Identity = 64/107 (59.81%), Postives = 81/107 (75.70%), Query Frame = 1
Query:    7 GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            GI+VSNHG RQLD V A+I AL EVV A +G+I V++DGGVR GTDV KALALGA  IF+GRP+++ LA +GE GV+ VL++L  E    M LSGC+S+ EI+ D I
Sbjct:  242 GIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLI 348          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: HAOX_DICDI (Hydroxyacid oxidase OS=Dictyostelium discoideum GN=haox PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.764e-27
Identity = 59/114 (51.75%), Postives = 79/114 (69.30%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWD 342
            A GIIVSNHG RQLD  P+TI  L  + K  +GR+P+ LDGG+RRGTDV KALA GA+ + IGRP+++ L+  G+ GV +VL +L  E +LAMAL+G  ++ +I    I   WD
Sbjct:  271 ADGIIVSNHGGRQLDTCPSTIEVLPYISKVVRGRVPLILDGGIRRGTDVLKALAFGANAVCIGRPIIWGLSTGGKDGVLKVLNLLNSELQLAMALTGITNISDINNSII---WD 381          
The following BLAST results are available for this feature:
BLAST of GO242156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
GOX2_ARATH2.913e-5487.90Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 ... [more]
GOX1_ARATH4.970e-5486.29Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 ... [more]
GOX_SPIOL2.727e-5282.26Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia... [more]
HAOX1_HUMAN5.712e-3466.35Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1... [more]
HAOX1_MOUSE7.461e-3465.38Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2... [more]
HAOX2_BOVIN5.911e-3159.81Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 S... [more]
HAOX2_MOUSE7.721e-3162.62Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
HAOX2_HUMAN6.536e-3062.86Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2... [more]
HAOX2_RAT4.236e-2959.81Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]
HAOX_DICDI6.764e-2751.75Hydroxyacid oxidase OS=Dictyostelium discoideum GN... [more]

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Properties
Property NameValue
Genbank description804 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 950 5, mRNA sequence.