GO242078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GO242078 vs. ExPASy Swiss-Prot
Match: CHLP_TOBAC (Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum GN=CHLP PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 6.154e-50 Identity = 92/101 (91.09%), Postives = 97/101 (96.04%), Query Frame = 2 Query: 5 GTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFGSYLYKKVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 307 G RM+DE DLRKYLEKWDKTYWPTYKVLD+LQKVFYRSNPAREAFVEMCADEYVQKMTF SYLYKKV PGNP+EDLKLAVNTIGSLVRANALRREMDKL++ Sbjct: 364 GKRMVDESDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVAPGNPIEDLKLAVNTIGSLVRANALRREMDKLSV 464
BLAST of GO242078 vs. ExPASy Swiss-Prot
Match: CHLP_ARATH (Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=CHLP PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 8.318e-47 Identity = 88/102 (86.27%), Postives = 97/102 (95.10%), Query Frame = 2 Query: 2 NGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFGSYLYKKVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 307 NG +MIDEGDLRKYLEKWDKTY PTY+VLDVLQKVFYRSNPAREAFVEMC DEYVQKMTF SYLYK+V PG+PLED+KLAVNTIGSLVRANALRRE++KL++ Sbjct: 366 NGKKMIDEGDLRKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCNDEYVQKMTFDSYLYKRVAPGSPLEDIKLAVNTIGSLVRANALRREIEKLSV 467
BLAST of GO242078 vs. ExPASy Swiss-Prot
Match: CHLP_ORYSJ (Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLP PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.958e-44 Identity = 82/102 (80.39%), Postives = 96/102 (94.12%), Query Frame = 2 Query: 2 NGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFGSYLYKKVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 307 NGTRM++E DLR+YL ++D+ YWPTYKVLDVLQKVFYRSN AREAFVEMCAD+YVQ+MTF SYLYK+VVPGNPL+D+KLAVNTIGSLVRA ALRREM+K+T+ Sbjct: 362 NGTRMVEESDLRRYLAEFDRLYWPTYKVLDVLQKVFYRSNAAREAFVEMCADDYVQRMTFDSYLYKRVVPGNPLDDIKLAVNTIGSLVRATALRREMEKVTL 463
BLAST of GO242078 vs. ExPASy Swiss-Prot
Match: CHLP_SYNY3 (Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=chlP PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.129e-27 Identity = 57/93 (61.29%), Postives = 72/93 (77.42%), Query Frame = 2 Query: 2 NGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFGSYLYKKVVPGNPLEDLKLAVNTIGSLVRANAL 280 NG R+ E DL++Y+++WDK Y TY VLD+LQ+VFYR++ REAFVEMC+D VQK+TF SYLYK VVP NPL +K+ TIGSL+R NAL Sbjct: 313 NGQRVPTEADLKQYIKQWDKRYGATYLVLDILQRVFYRTDATREAFVEMCSDIDVQKLTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 405 The following BLAST results are available for this feature:
BLAST of GO242078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
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