GO242055

Overview
NameGO242055
Unique NameGO242055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242055 vs. ExPASy Swiss-Prot
Match: CALX_SOYBN (Calnexin homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.455e-25
Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 1
Query:    1 EAAAGSDGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKK-AKV 231
            EAA GSDG++GFQK VFDLLYK+ADIPFL  +K KI D+IEK EKQPNLTIGILV+VV V +++ F++IFGGKK AKV
Sbjct:  426 EAATGSDGISGFQKKVFDLLYKIADIPFLSEHKSKIFDLIEKAEKQPNLTIGILVAVVVVFVSIFFRLIFGGKKPAKV 503          
BLAST of GO242055 vs. ExPASy Swiss-Prot
Match: CALX2_ARATH (Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.213e-22
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 1
Query:    1 EAAAGSDGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKKAKV 231
            EAA  +DGL  +QK VFDLLYKVADI FL AYK KI+++IEK E QPNLTIG+L+S+V V +++ FK+IFGG KAKV
Sbjct:  419 EAAGEADGLKSYQKKVFDLLYKVADISFLSAYKSKIMELIEKAETQPNLTIGVLISIVIVFLSLFFKLIFGGAKAKV 495          
BLAST of GO242055 vs. ExPASy Swiss-Prot
Match: CALX_PEA (Calnexin homolog OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.288e-21
Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 1
Query:    4 AAAGSDGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKK 222
            A + S+G+AG QK  FDLLYK+ADI FL   K KII++IEKGEKQPNLTIGI+VSVV V +++ F++IFGGKK
Sbjct:  432 ARSESEGIAGIQKKAFDLLYKIADIAFLSGQKEKIIEIIEKGEKQPNLTIGIIVSVVIVFVSIFFRLIFGGKK 504          
BLAST of GO242055 vs. ExPASy Swiss-Prot
Match: CALX1_ARATH (Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.530e-20
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 1
Query:    1 EAAAGSDGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKKA 225
            EAA  +DGL  +QK VFDLL KVAD+ FL AYK KI ++IEK E+QPNLTIG+LV++V V  ++  K+IFGGKKA
Sbjct:  417 EAAGSADGLKSYQKVVFDLLNKVADLSFLSAYKSKITELIEKAEQQPNLTIGVLVAIVVVFFSLFLKLIFGGKKA 491          
BLAST of GO242055 vs. ExPASy Swiss-Prot
Match: CALX_HELTU (Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.304e-20
Identity = 41/69 (59.42%), Postives = 59/69 (85.51%), Query Frame = 1
Query:   19 DGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKKA 225
            DGL G QK VFD+LYK+AD+PFL  +K+K++++IEK E QPN+TIG++VS++ VI ++L K++FGGKKA
Sbjct:  426 DGLKGIQKAVFDVLYKIADLPFLGDHKVKVLELIEKAETQPNITIGVIVSIIVVIFSILLKLLFGGKKA 494          
The following BLAST results are available for this feature:
BLAST of GO242055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CALX_SOYBN4.455e-2571.79Calnexin homolog OS=Glycine max PE=2 SV=1[more]
CALX2_ARATH1.213e-2266.23Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g... [more]
CALX_PEA2.288e-2165.75Calnexin homolog OS=Pisum sativum PE=2 SV=1[more]
CALX1_ARATH2.530e-2062.67Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1... [more]
CALX_HELTU3.304e-2059.42Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1[more]
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Properties
Property NameValue
Genbank description703 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 848 5, mRNA sequence.