GO242004

Overview
NameGO242004
Unique NameGO242004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8167 contig Csv1_Contig8167:697..1222. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO242004 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.252e-28
Identity = 63/70 (90.00%), Postives = 64/70 (91.43%), Query Frame = 1
Query:    1 TPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRIGVASVIKICIVK 210
            TPARHSLIYRGLIPIL EGSAKATDAESTEVILE ALKSA E+ LC PGDAVVALHRIG ASVIKICIVK
Sbjct:  442 TPARHSLIYRGLIPILGEGSAKATDAESTEVILEAALKSATERALCKPGDAVVALHRIGAASVIKICIVK 511          
BLAST of GO242004 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.616e-27
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 1
Query:    1 TPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRIGVASVIKICIVK 210
            TPARHSL+YRGLIP+L EGSAKATD+ESTEVILE ALKSA+ +GLC PGDAVVALHRIG ASVIKIC+VK
Sbjct:  441 TPARHSLVYRGLIPLLGEGSAKATDSESTEVILEAALKSAVTRGLCKPGDAVVALHRIGSASVIKICVVK 510          
BLAST of GO242004 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.887e-18
Identity = 45/70 (64.29%), Postives = 55/70 (78.57%), Query Frame = 1
Query:    1 TPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRIGVASVIKICIVK 210
            +PARHSLI+RGL+P+L  GSA+A+  ESTE  L+ AL+ A  KGLC  GD+VVALHR+G ASVIKI  VK
Sbjct:  439 SPARHSLIFRGLVPVLHAGSARASHEESTEEALDFALQHAKTKGLCKQGDSVVALHRVGTASVIKIVTVK 508          
BLAST of GO242004 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.328e-13
Identity = 42/69 (60.87%), Postives = 49/69 (71.01%), Query Frame = 1
Query:    4 PARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRIGVASVIKICIVK 210
            PARHSLIYRGL+P+L  GSA+A+  ESTE  LE A +   +K LC  GD+VVAL R G A VIKI  VK
Sbjct:  429 PARHSLIYRGLVPVLYAGSARASIDESTEETLEFASEYGKKKQLCKTGDSVVALFRTGNAIVIKILTVK 497          
The following BLAST results are available for this feature:
BLAST of GO242004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
KPYC_SOYBN4.252e-2890.00Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_SOLTU1.616e-2784.29Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYC_TOBAC8.887e-1864.29Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYC_ARATH1.328e-1360.87Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
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Properties
Property NameValue
Genbank description652 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 795 5, mRNA sequence.