GO241977

Overview
NameGO241977
Unique NameGO241977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241977 vs. ExPASy Swiss-Prot
Match: APC10_ARATH (Anaphase-promoting complex subunit 10 OS=Arabidopsis thaliana GN=At2g18290 PE=2 SV=2)

HSP 1 Score: 329.331 bits (843), Expect = 2.197e-89
Identity = 155/192 (80.73%), Postives = 170/192 (88.54%), Query Frame = 3
Query:  177 MATESSESEEEGKITGGNHQLLIDDDLREMGKKAAWSVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQFQFTSSEFNTYSTVR 752
            MATESSESEEEGKI+GGN++L+IDDDLREMGK AAWSVSSCKPGNGV+ LRDDNL+TYWQSDG QPHL+NI             YVDFKLDESYTPSKIS+RAGDGFHNLKEIK+VELVKPTGWV +SLSG DPR+TFVNTFMLQI +LSNHLNGRDTH+RQIK+YGPRPNPIPHQ FQFTS EF TYST+R
Sbjct:    1 MATESSESEEEGKISGGNYKLIIDDDLREMGKNAAWSVSSCKPGNGVTTLRDDNLETYWQSDGLQPHLINIQFQKKVKLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKSVELVKPTGWVCLSLSGTDPRETFVNTFMLQIAILSNHLNGRDTHIRQIKVYGPRPNPIPHQPFQFTSMEFLTYSTLR 192          
BLAST of GO241977 vs. ExPASy Swiss-Prot
Match: APC10_MOUSE (Anaphase-promoting complex subunit 10 OS=Mus musculus GN=Anapc10 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.054e-47
Identity = 91/166 (54.82%), Postives = 118/166 (71.08%), Query Frame = 3
Query:  255 LREMGKKAAWSVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQFQFTSSEFNTYSTVR 752
            +RE+G +A WS+SSCKPG GV  LRDDNL+TYWQSDG+QPHLVNI             Y D+K DESYTPSKISVR G+ FHNL+EI+ +ELV+P+GW+++ L+ N  + T   TFM+QI VL+NH NGRDTH+RQIKIY P       +  + T+ +F  Y ++R
Sbjct:   22 VREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPT--RTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR 185          
BLAST of GO241977 vs. ExPASy Swiss-Prot
Match: APC10_HUMAN (Anaphase-promoting complex subunit 10 OS=Homo sapiens GN=ANAPC10 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.054e-47
Identity = 91/166 (54.82%), Postives = 118/166 (71.08%), Query Frame = 3
Query:  255 LREMGKKAAWSVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQFQFTSSEFNTYSTVR 752
            +RE+G +A WS+SSCKPG GV  LRDDNL+TYWQSDG+QPHLVNI             Y D+K DESYTPSKISVR G+ FHNL+EI+ +ELV+P+GW+++ L+ N  + T   TFM+QI VL+NH NGRDTH+RQIKIY P       +  + T+ +F  Y ++R
Sbjct:   22 VREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPT--RTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR 185          
BLAST of GO241977 vs. ExPASy Swiss-Prot
Match: APC10_BOVIN (Anaphase-promoting complex subunit 10 OS=Bos taurus GN=ANAPC10 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.033e-46
Identity = 90/166 (54.22%), Postives = 118/166 (71.08%), Query Frame = 3
Query:  255 LREMGKKAAWSVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQFQFTSSEFNTYSTVR 752
            +RE+G +A WS+SSCKPG GV  LRDDNL+TYWQSDG+QPHLVN+             Y D+K DESYTPSKISVR G+ FHNL+EI+ +ELV+P+GW+++ L+ N  + T   TFM+QI VL+NH NGRDTH+RQIKIY P       +  + T+ +F  Y ++R
Sbjct:   22 VREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNLQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPT--RTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR 185          
BLAST of GO241977 vs. ExPASy Swiss-Prot
Match: APC10_DROME (Anaphase-promoting complex subunit 10 OS=Drosophila melanogaster GN=CG11419 PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.706e-41
Identity = 83/168 (49.40%), Postives = 116/168 (69.05%), Query Frame = 3
Query:  255 LREMGKKAAWSVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGP-RPNPIPHQQF-QFTSSEFNTYSTVR 752
            +RE+G +A WS+SSCKPG GV  LRD+ +DTYWQSDG  PHLVNI             Y D+KLDESYTPS+IS+R+G  F++L+E++ ++L +PTGWV I +   + +   + TFMLQI V+SNH NGRDTH+RQI+I+ P      P + F +F + +F  ++T+R
Sbjct:   30 VREVGAQAVWSLSSCKPGFGVERLRDNIMDTYWQSDGQLPHLVNIQFHKRTNISQIYIYTDYKLDESYTPSRISIRSGTNFNDLQELQVMDLTEPTGWVQIPIKDGNVKS--IRTFMLQIAVISNHQNGRDTHMRQIRIHAPVEGKHYPLELFGKFGTVDFQKFATIR 195          
BLAST of GO241977 vs. ExPASy Swiss-Prot
Match: APC10_DICDI (Anaphase-promoting complex subunit 10 OS=Dictyostelium discoideum GN=anapc10 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.265e-36
Identity = 79/165 (47.88%), Postives = 109/165 (66.06%), Query Frame = 3
Query:  261 EMGKKAAWSVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQF-QFTSSEFNTYSTVR 752
            E+GK A+WSVSS KPG+GV  LRD+NLDT+WQSD  QPH + I             + D+KLDESYTP KIS++AG   H+L+EI   EL +P+GW+ I LS N   +  +   +LQI +LSN  NGRD+H+RQIK+YG + +   + Q+ +F S E + + T+R
Sbjct:   27 EIGKHASWSVSSAKPGSGVEQLRDNNLDTFWQSDAQQPHHITIQFPKKCYIENLLIHCDYKLDESYTPCKISIKAGTILHDLQEIILTELEEPSGWINIPLSFN---NNSLKANLLQISILSNLKNGRDSHIRQIKVYGKKISIENYTQYPKFNSPEVSMFQTLR 188          
BLAST of GO241977 vs. ExPASy Swiss-Prot
Match: APC10_SCHPO (Anaphase-promoting complex subunit 10 OS=Schizosaccharomyces pombe GN=apc10 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.566e-31
Identity = 66/161 (40.99%), Postives = 101/161 (62.73%), Query Frame = 3
Query:  261 EMGKKAAWSVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPR-------PNPIPHQQFQFTS 722
            ++G  A W+ SS K G  +  +RDDN+DTYWQSDG+QPH ++I             Y+ + LDESYTPS + + AG GF +L+ + TV++ +PTGWV++ + G+  R+  ++  ++QI +L+NH +G+D+HVR IKIY P         + IP+   QF S
Sbjct:   25 DIGNLAQWTCSSEKSGFPIRLVRDDNIDTYWQSDGSQPHTIHIKFVKRVSIKYVSMYLQYTLDESYTPSTLRISAGTGFQDLEIVTTVQVEEPTGWVHVPV-GDFGRNGLLDVHLIQIKILANHQSGKDSHVRLIKIYAPEIEQPAIAVDEIPYTSLQFIS 184          
BLAST of GO241977 vs. ExPASy Swiss-Prot
Match: APC10_YEAST (Anaphase-promoting complex subunit DOC1 OS=Saccharomyces cerevisiae GN=DOC1 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 5.340e-19
Identity = 50/139 (35.97%), Postives = 69/139 (49.64%), Query Frame = 3
Query:  276 AAWSVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNP 692
            A W  SS K GN V    DDN DT+WQSDG QPH ++I             +     DESY PS + V AG    + +  K +E+    GWV +    N   D  +    ++++   NH NG+DTH+R I++Y P   P
Sbjct:   88 ALWKPSSFKLGNPVDFALDDNYDTFWQSDGGQPHQLDIMFSKRMDICVMAIFFSMIADESYAPSLVKVYAGHSPSDARFYKMLEVRNVNGWVALRFLDNREDDQLLKCQFIRLLFPVNHENGKDTHLRGIRLYVPSNEP 226          
The following BLAST results are available for this feature:
BLAST of GO241977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
APC10_ARATH2.197e-8980.73Anaphase-promoting complex subunit 10 OS=Arabidops... [more]
APC10_MOUSE6.054e-4754.82Anaphase-promoting complex subunit 10 OS=Mus muscu... [more]
APC10_HUMAN6.054e-4754.82Anaphase-promoting complex subunit 10 OS=Homo sapi... [more]
APC10_BOVIN1.033e-4654.22Anaphase-promoting complex subunit 10 OS=Bos tauru... [more]
APC10_DROME1.706e-4149.40Anaphase-promoting complex subunit 10 OS=Drosophil... [more]
APC10_DICDI1.265e-3647.88Anaphase-promoting complex subunit 10 OS=Dictyoste... [more]
APC10_SCHPO3.566e-3140.99Anaphase-promoting complex subunit 10 OS=Schizosac... [more]
APC10_YEAST5.340e-1935.97Anaphase-promoting complex subunit DOC1 OS=Sacchar... [more]
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Properties
Property NameValue
Genbank description625 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 768 5, mRNA sequence.