GO241976

Overview
NameGO241976
Unique NameGO241976
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4394 contig Csv1_Contig4394:83..1052. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241976 vs. ExPASy Swiss-Prot
Match: TRNH1_ARATH (Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.882e-71
Identity = 137/236 (58.05%), Postives = 167/236 (70.76%), Query Frame = 2
Query:    2 GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXLSHIGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVEHLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANGFN 709
            G A VEE AG GAV+HTC+RNE ELN+CL +WQ KGF V+GSVCDA+   +REKL+Q V S F GKL+IL+NN+G    KPT++Y+AE++S  ++TN ES YHL QL +PLLKA              +     GSIY ATK A+NQL RNLACEWA D IR N+VAP    T L E + ++ EF   VI+R PL R GEPEEV+SLVA+LC+PAASYITGQ I VDGG T NGF+
Sbjct:   27 GHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD-EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTVNGFS 261          
BLAST of GO241976 vs. ExPASy Swiss-Prot
Match: TRNH_DATST (Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 3.005e-69
Identity = 128/238 (53.78%), Postives = 169/238 (71.01%), Query Frame = 2
Query:    2 GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXLSHIGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE---HLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANGF 706
            G A VEELA  GA V+TCSR++ +L++CL++W+ KGF VSG VCD +S  QR+ L++ V S FNGKLNIL+NN GT I K    ++AE+YS IM TNFE++Y+LCQL +PLLKA              +  +   SIY A+K A+NQ+T++LACEWAKD+IR N+VAPW   T ++E    +   K+ ++ +I R P++R GEP EV+SLV YLCLP ASYITGQII VDGG+T NGF
Sbjct:   30 GYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLAHPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDSIRVNAVAPWIINTPIIEAACQVPSQKKNIESLIGRAPMKRAGEPSEVSSLVTYLCLPTASYITGQIICVDGGYTVNGF 267          
BLAST of GO241976 vs. ExPASy Swiss-Prot
Match: TRN1_DATST (Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.813e-67
Identity = 131/238 (55.04%), Postives = 166/238 (69.75%), Query Frame = 2
Query:    2 GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXLSHIGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVEHLLE----NKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANG 703
            G A VEELAGLGA V+TCSRNE EL++CL+ W+ KG  V GSVCD  S  +R+KL+Q V   F+GKLNILVNN G  I K   +++ ++Y+ IM TNFE+ YHL Q+ YPLLKA               S + S S+Y A+K A+NQ+T++LACEWAKDNIR NSVAP    T LVE  ++     KE +D  I +TP+ R G+P+EV++L+A+LC PAASYITGQII  DGGFTANG
Sbjct:   34 GYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTANG 271          
BLAST of GO241976 vs. ExPASy Swiss-Prot
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.911e-64
Identity = 128/237 (54.01%), Postives = 163/237 (68.78%), Query Frame = 2
Query:    2 GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXLSHIGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVEHLL---ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTANG 703
            G   VEELA LGA V+TCSRN+ EL++CL +W+SKGF V  SVCD +S  +RE+ ++ V + F+GKLNILVNN G  I K   +Y+ E+YS IM+ NFE+ YHL  L +P LKA               S +   ++YGATK AM+QLTR LA EWAKDNIR N V P    TS+VE  +   E KE +DK+I R  L+R+GEP+E+A++VA+LC PAASY+TGQII VDGGF ANG
Sbjct:   22 GYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSMVEMTIQDPEQKENLDKLIDRCALRRMGEPKELAAVVAFLCFPAASYVTGQIIYVDGGFMANG 258          
BLAST of GO241976 vs. ExPASy Swiss-Prot
Match: TRN2_DATST (Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.597e-62
Identity = 126/236 (53.39%), Postives = 159/236 (67.37%), Query Frame = 2
Query:    2 GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXLSHIGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVEHLL---ENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 700
            G   VEELA LGA V+TCSRN+ ELN CL +W+SKGF V  SVCD +S  +R++L+  V + F+GKLNILVNN G  I K   +Y+ E+YS IM+ NFE+ YHL  L +P LKA                 +   ++YGATK AM+QLTR LA EWAKDNIR N V P    TSLVE  +   E KE ++K+I R  L+R+GEP+E+A++VA+LC PAASY+TGQII VDGG  AN
Sbjct:   22 GYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMAN 257          
BLAST of GO241976 vs. ExPASy Swiss-Prot
Match: DHRS4_RABIT (Dehydrogenase/reductase SDR family member 4 OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.945e-24
Identity = 71/230 (30.87%), Postives = 117/230 (50.87%), Query Frame = 2
Query:    2 GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXLSHIGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVEHLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 688
            G A    LA  GA V   SR +  +++ +   Q++G  V+G+VC     + RE+L+       +G ++ILV+N   N      ++ + E + KI+  N ++   + + V P ++                +       Y  +K A+  LT+NLA E A  NIR N +AP   KTS  + L E+K   + +I +  ++R+G+PEE A +V++LC   ASYITG+ + V GG
Sbjct:   27 GLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGKAEDRERLVA-TALNLHGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAPGLIKTSFSKALWEDKAQEENIIQKLRIRRLGKPEECAGIVSFLCSEDASYITGETVVVAGG 255          
BLAST of GO241976 vs. ExPASy Swiss-Prot
Match: PECR_HUMAN (Peroxisomal trans-2-enoyl-CoA reductase OS=Homo sapiens GN=PECR PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 4.252e-23
Identity = 77/237 (32.49%), Postives = 118/237 (49.79%), Query Frame = 2
Query:    2 GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-----KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY-PLLKAXXXXXXXXXXXXXXLSHIGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW--YTKTSLVEHLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 688
            G+A V+EL  LG+ V   SR    L     E Q+     K   V    C+  + ++   L++     F GK+N LVNN G     P    S++ +  ++ TN   T+++C+ VY   +K                  +   S  GA +A +  LT++LA EWA   IR N VAP   Y++T++  +    + F +    + P +R+G PEEV+S+V +L  PAAS+ITGQ + VDGG
Sbjct:   31 GKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHS--GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG 264          
BLAST of GO241976 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.553e-23
Identity = 70/230 (30.43%), Postives = 115/230 (50.00%), Query Frame = 2
Query:    2 GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXLSHIGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVEHLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 688
            G A    LA  GA V   SR +  +++ +   + +G  V+G+VC     + RE+L+     K +G ++IL++N   +      ++   E + KI+  N ++T  L + V P +                 S   S   Y  +K A+  LT+NLA E A+ N+R N +AP   +TS    L E+    + + A   ++R+G+PEE A +V++LC   ASYITG+ + V GG
Sbjct:   27 GFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAEDRERLVA-TAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAESNVRVNCLAPGLIRTSFSRVLWEDPARQESIKATFQIKRIGKPEECAGIVSFLCSEDASYITGETVVVAGG 255          
BLAST of GO241976 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.253e-23
Identity = 67/234 (28.63%), Postives = 114/234 (48.72%), Query Frame = 2
Query:    2 GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP-LLKAXXXXXXXXXXXXXXLSHIGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVEHLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGGFTAN 700
            G    + LA  GA V    RN   L+     ++++G   S +V D    D     +  +  +  G ++IL+NN G   R P  E+S +++  +M+TN  + + + Q V   ++                L+  G    Y ATK A+  LT+ +A +W +  ++ N +AP Y  T + E L+ ++EF D +  RTP  R G+ EE+     +L   A+S++ GQ++ VDGG T +
Sbjct:   24 GLTLAKGLARYGAEVVLNGRNAESLDSAQSGFEAEGLKASTAVFDVTDQDAVIDGVAAI-ERDMGPIDILINNAGIQRRAPLEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAP-YTATKGAVKNLTKGMATDWGRHGLQINGLAPGYFATEMTERLVADEEFTDWLCKRTPAGRWGQVEELVGAAVFLSSRASSFVNGQVLMVDGGITVS 255          
BLAST of GO241976 vs. ExPASy Swiss-Prot
Match: PECR_RAT (Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus GN=Pecr PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.616e-22
Identity = 72/238 (30.25%), Postives = 117/238 (49.16%), Query Frame = 2
Query:    2 GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ-----SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXLSHIG--SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW--YTKTSLVEHLLENKEFVDKVIARTPLQRVGEPEEVASLVAYLCLPAASYITGQIISVDGG 688
            G+A   EL  LG  V   SR    L   + E +     S    V+   C+    ++   L++   +K+ GK+N LVNN G     P  + +A+ +  ++ TN   T+++C+ VY    +              L + G  + +  GA +A +  LT+ +A  WA   +R N VAP   Y++T++  +    +   +      P +RVG PEE++ LV +L  PAAS+ITGQ+I+VDGG
Sbjct:   31 GKAISRELLHLGCNVVIASRKLDRLTAAVDELRASQPPSSSTQVTAIQCNIRKEEEVNNLVKSTLAKY-GKINFLVNNAGGQFMAPAEDITAKGWQAVIETNLTGTFYMCKAVY---NSWMKDHGGSIVNIIVLLNNGFPTAAHSGAARAGVYNLTKTMALTWASSGVRINCVAPGTIYSQTAVDNYGELGQTMFEMAFENIPAKRVGLPEEISPLVCFLLSPAASFITGQLINVDGG 264          
The following BLAST results are available for this feature:
BLAST of GO241976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
TRNH1_ARATH1.882e-7158.05Tropinone reductase homolog At1g07440 OS=Arabidops... [more]
TRNH_DATST3.005e-6953.78Tropinone reductase homolog OS=Datura stramonium P... [more]
TRN1_DATST2.813e-6755.04Tropinone reductase 1 OS=Datura stramonium GN=TR1 ... [more]
TRN2_HYONI2.911e-6454.01Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 P... [more]
TRN2_DATST1.597e-6253.39Tropinone reductase 2 OS=Datura stramonium GN=TR2 ... [more]
DHRS4_RABIT2.945e-2430.87Dehydrogenase/reductase SDR family member 4 OS=Ory... [more]
PECR_HUMAN4.252e-2332.49Peroxisomal trans-2-enoyl-CoA reductase OS=Homo sa... [more]
DHRS4_BOVIN5.553e-2330.43Dehydrogenase/reductase SDR family member 4 OS=Bos... [more]
GNO_GLUOX7.253e-2328.63Gluconate 5-dehydrogenase OS=Gluconobacter oxydans... [more]
PECR_RAT1.616e-2230.25Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus ... [more]

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Properties
Property NameValue
Genbank description624 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 767 5, mRNA sequence.