GO241578

Overview
NameGO241578
Unique NameGO241578
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1916 contig Csv1_Contig1916:6..624. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGKY_TOBAC (Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 9.643e-77
Identity = 115/132 (87.12%), Postives = 122/132 (92.42%), Query Frame = 2 
Query:  101 MAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            MA KKSV  LKEADLKGKRVFVRVDLNVPLD+N NITDD R+RAAVPTIKYLM HG+ VIL+SHLGRPKGVTPKYSLKPLVPRLSELLGVEVK+AND IG EVEK+VAEIPEGGVLLLENVRF+KEEEKN P
Sbjct:    1 MAVKKSVGSLKEADLKGKRVFVRVDLNVPLDENFNITDDTRIRAAVPTIKYLMQHGSHVILASHLGRPKGVTPKYSLKPLVPRLSELLGVEVKIANDSIGPEVEKLVAEIPEGGVLLLENVRFYKEEEKNEP 132

HSP 2 Score: 78.5666 bits (192), Expect = 9.643e-77
Identity = 37/49 (75.51%), Postives = 44/49 (89.80%), Query Frame = 3 
Query:  474 RRKRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + + + EFAKKLASLADLYVNDAFG+AHRAHA TEGVAK+LKP+VAG
Sbjct:  125 KEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPAVAG 173
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGKH_TOBAC (Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.540e-71
Identity = 112/164 (68.29%), Postives = 124/164 (75.61%), Query Frame = 2 
Query:    5 FTHLAFTNLRSHSKI*PKPFLDFSDLVFDRIKMAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            FT+   T LRS         L  S      +   AKKSV  L  A+LKGK+VFVR DLNVPLDDN NITDD R+RAAVPTIK+LM +GAKVILSSHLGRPKGVTPKYSL PLVPRLSELLG++V    DCIG EVEK+VA +PEGGVLLLENVRF+KEEEKN P
Sbjct:   52 FTNHVATKLRS---------LKSSSKPIRGVASMAKKSVGDLTAAELKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLMANGAKVILSSHLGRPKGVTPKYSLAPLVPRLSELLGIQVVKVEDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNEP 206

HSP 2 Score: 79.337 bits (194), Expect = 2.540e-71
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 3 
Query:  474 RRKRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + + + EFAKKLASLADLYVNDAFG+AHRAHA TEGV KFLKPSVAG
Sbjct:  199 KEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAG 247
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGKH_SPIOL (Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 3.315e-71
Identity = 102/130 (78.46%), Postives = 117/130 (90.00%), Query Frame = 2 
Query:  107 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            AKKSV  L  ADLKGK+VFVR DLNVPLDD+ NITDD R+RAA+PTIK+L+ +GAKVILSSHLGRPKGVTPK+SL PLVPRLSELLG++V  A+DCIG +VEK+VAE+PEGGVLLLENVRF+KEEEKN P
Sbjct:   30 AKKSVGDLTSADLKGKKVFVRADLNVPLDDSQNITDDTRIRAAIPTIKHLINNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGLQVVKADDCIGPDVEKLVAELPEGGVLLLENVRFYKEEEKNDP 159

HSP 2 Score: 80.8777 bits (198), Expect = 3.315e-71
Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 3 
Query:  474 RRKRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + + D EFAKKLASLADLYVNDAFG+AHRAHA TEGV KFLKPSVAG
Sbjct:  152 KEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAG 200
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 4.721e-70
Identity = 102/132 (77.27%), Postives = 115/132 (87.12%), Query Frame = 2 
Query:  101 MAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            MA K+SV  L EADLKGK+VFVR DLNVPLDD   ITDD R+RA++PTIKYL+  GAKVIL+SHLGRPKGVTPK+SLKPLV RLSELLG+EV MA DCIGEEVEK+ A +P+GGVLLLENVRF+KEEEKN P
Sbjct:    1 MATKRSVGTLGEADLKGKKVFVRADLNVPLDDAQKITDDTRIRASIPTIKYLLEKGAKVILASHLGRPKGVTPKFSLKPLVARLSELLGLEVVMAPDCIGEEVEKLAAALPDGGVLLLENVRFYKEEEKNDP 132

HSP 2 Score: 78.5666 bits (192), Expect = 4.721e-70
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 3 
Query:  474 RRKRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + + D EFAKKLAS+ADLYVNDAFG+AHRAHA TEGV KFL+PSVAG
Sbjct:  125 KEEEKNDPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAG 173
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGKH_ARATH (Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 1.046e-69
Identity = 101/130 (77.69%), Postives = 114/130 (87.69%), Query Frame = 2 
Query:  107 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            AKKSV  L   DLKGK+VFVR DLNVPLDDN NITDD R+RAA+PTIK+L+ +GAKVILS+HLGRPKGVTPK+SL PLVPRLSELLG+EV  A+DCIG EVE +VA +PEGGVLLLENVRF+KEEEKN P
Sbjct:   75 AKKSVGDLNSVDLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKFLIENGAKVILSTHLGRPKGVTPKFSLAPLVPRLSELLGIEVVKADDCIGPEVETLVASLPEGGVLLLENVRFYKEEEKNEP 204

HSP 2 Score: 78.1814 bits (191), Expect = 1.046e-69
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 3 
Query:  474 RRKRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + + + +FAKKLASLADLYVNDAFG+AHRAHA TEGV KFLKPSVAG
Sbjct:  197 KEEEKNEPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAG 245
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGKH_WHEAT (Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.141e-68
Identity = 100/130 (76.92%), Postives = 112/130 (86.15%), Query Frame = 2 
Query:  107 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            AKKSV  L  ADL+GKRV VR DLNVPLDDN NITDD R+RAA+PTIKYL+ +GAKVIL+SHLGRPKGVTPK+SL PLVPRLSELLG+EVK A D IG EVEK+VA++  G VLLLENVRF+KEEEKN P
Sbjct:   74 AKKSVGDLTAADLEGKRVLVRADLNVPLDDNQNITDDTRIRAAIPTIKYLLSNGAKVILTSHLGRPKGVTPKFSLAPLVPRLSELLGIEVKKAEDVIGPEVEKLVADLANGAVLLLENVRFYKEEEKNDP 203

HSP 2 Score: 79.337 bits (194), Expect = 1.141e-68
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 3 
Query:  474 RRKRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + + D EFAKKLASLADL+VNDAFG+AHRAHA TEGV KFLKPSVAG
Sbjct:  196 KEEEKNDPEFAKKLASLADLFVNDAFGTAHRAHASTEGVTKFLKPSVAG 244
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGKH_VOLCA (Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.584e-58
Identity = 90/133 (67.67%), Postives = 104/133 (78.20%), Query Frame = 2 
Query:  104 AAKKSVSVLKEADLKGKRVFVRVDLNVPLDDN-LNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            A KKSV  L +ADL+GKRVFVR DLNVPLD   L ITDD R+RAAVPT+KYL+ +GAKV+L+SHLGRPKG    KY L P+V RLSELLG EVK  +DCIG  VE+ VA +  G +LLLENVRF+KEEEKN P
Sbjct:   61 AVKKSVGDLGKADLEGKRVFVRADLNVPLDKKTLAITDDTRIRAAVPTLKYLLDNGAKVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGKEVKKVDDCIGPSVEQAVASLKSGELLLLENVRFYKEEEKNDP 193

HSP 2 Score: 78.1814 bits (191), Expect = 1.584e-58
Identity = 38/49 (77.55%), Postives = 42/49 (85.71%), Query Frame = 3 
Query:  474 RRKRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + + D EFAKKLAS ADLYVNDAFG+AHRAHA TEGV KFLKPSVAG
Sbjct:  186 KEEEKNDPEFAKKLASNADLYVNDAFGTAHRAHASTEGVTKFLKPSVAG 234
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGKH_CHLRE (Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 4.155e-56
Identity = 88/133 (66.17%), Postives = 101/133 (75.94%), Query Frame = 2 
Query:  104 AAKKSVSVLKEADLKGKRVFVRVDLNVPLDD-NLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            A KKSV  L +ADL+GKRVFVR DLNVPLD   L ITDD R+RAAVPT+KYL+ +GAKV+L+SHLGRPKG    KY L P+V RLSELLG  V   +DCIG EVEK V  +  G +LLLEN RF+KEEEKN P
Sbjct:   60 AVKKSVGDLHKADLEGKRVFVRADLNVPLDKATLAITDDTRIRAAVPTLKYLLDNGAKVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGKPVTKVDDCIGPEVEKAVGAMKNGELLLLENCRFYKEEEKNEP 192

HSP 2 Score: 75.485 bits (184), Expect = 4.155e-56
Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = 3 
Query:  474 RRKRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + + + EFAKKLA+ ADLYVNDAFG+AHRAHA TEGV KFLKPSVAG
Sbjct:  185 KEEEKNEPEFAKKLAANADLYVNDAFGTAHRAHASTEGVTKFLKPSVAG 233
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.090e-53
Identity = 82/130 (63.08%), Postives = 95/130 (73.08%), Query Frame = 2 
Query:  107 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            +KK+V+ L  AD+ GKR  VRVD NVPLDD  NITDD R+RAA+PTI+ L   GAKVIL+SH GRPKGV  K  L P+  RLSELLG EV   +D IG+EV   VA +  G VLLLENVRF+KEEEKN P
Sbjct:    2 SKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDEKLRLTPVAKRLSELLGQEVVKTDDSIGDEVAAKVAALQNGQVLLLENVRFYKEEEKNDP 131

HSP 2 Score: 73.559 bits (179), Expect = 1.090e-53
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 3 
Query:  474 RRKRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + + D EFAKKLA+ AD YVNDAFG+AHRAHA TEGV KFL PSVAG
Sbjct:  124 KEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAG 172
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_ANASP (Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.421e-53
Identity = 82/130 (63.08%), Postives = 95/130 (73.08%), Query Frame = 2 
Query:  107 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            +KK+V+ L  AD+ GKR  VRVD NVPLDD  NITDD R+RAA+PTI+ L   GAKVIL+SH GRPKGV  K  L P+  RLSELLG EV   +D IG+EV   VA +  G VLLLENVRF+KEEEKN P
Sbjct:    2 SKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDEKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVATLQNGQVLLLENVRFYKEEEKNDP 131

HSP 2 Score: 73.559 bits (179), Expect = 1.421e-53
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 3 
Query:  474 RRKRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + + D EFAKKLA+ AD YVNDAFG+AHRAHA TEGV KFL PSVAG
Sbjct:  124 KEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAG 172
The following BLAST results are available for this feature:
BLAST of GO241578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKY_TOBAC9.643e-7787.12Phosphoglycerate kinase, cytosolic OS=Nicotiana ta... [more]
PGKH_TOBAC2.540e-7168.29Phosphoglycerate kinase, chloroplastic OS=Nicotian... [more]
PGKH_SPIOL3.315e-7178.46Phosphoglycerate kinase, chloroplastic (Fragment) ... [more]
PGKY_WHEAT4.721e-7077.27Phosphoglycerate kinase, cytosolic OS=Triticum aes... [more]
PGKH_ARATH1.046e-6977.69Phosphoglycerate kinase, chloroplastic OS=Arabidop... [more]
PGKH_WHEAT1.141e-6876.92Phosphoglycerate kinase, chloroplastic OS=Triticum... [more]
PGKH_VOLCA1.584e-5867.67Phosphoglycerate kinase, chloroplastic OS=Volvox c... [more]
PGKH_CHLRE4.155e-5666.17Phosphoglycerate kinase, chloroplastic OS=Chlamydo... [more]
PGK_ANAVT1.090e-5363.08Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]
PGK_ANASP1.421e-5363.08Phosphoglycerate kinase OS=Anabaena sp. (strain PC... [more]

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Properties
Property NameValue
Genbank description226 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 342 5, mRNA sequence.