GO241560

Overview
NameGO241560
Unique NameGO241560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
GO241560_ssr66 microsatellite GO241560_ssr66:66..77. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig867 contig Csv1_Contig867:182..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of GO241560 vs. ExPASy Swiss-Prot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 8.855e-34
Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 3 
Query:   96 MGGGNGQKAKMAREKNLEEQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHLKK 329
            MGGGN QK+ MAR KNLE+ KAA KGSQLE NKKAMSIQCKVCMQTF+CTTSEVKCREHAEAKHPK+D+ ACFPHLKK
Sbjct:    1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK 78
The following BLAST results are available for this feature:
BLAST of GO241560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2309_ARATH8.855e-3484.62Uncharacterized protein At2g23090 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank description208 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 324 5, mRNA sequence.