GO241430

Overview
NameGO241430
Unique NameGO241430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13723 contig Csv1_Contig13723:1..491. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of GO241430 vs. ExPASy Swiss-Prot
Match: Y1815_ARATH (UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana GN=At1g28150 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19
Identity = 44/61 (72.13%), Postives = 53/61 (86.89%), Query Frame = 1 
Query:   88 ACXSSPIDEPILKEAXKEPVAFVGGMFAGLXRLDLNDDPLKDWVTRTVEAAGITEEEIKAE 270
            +C + P  EPIL EA KEP+AF+GGMFAGL RLDLN++PLKDWVTRTVEA+GITEEE+ A+
Sbjct:   48 SCFNLP-QEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDAD 107
The following BLAST results are available for this feature:
BLAST of GO241430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1815_ARATH5.150e-1972.13UPF0426 protein At1g28150, chloroplastic OS=Arabid... [more]
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Properties
Property NameValue
Genbank description78 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 162 5, mRNA sequence.