GO241419

Overview
NameGO241419
Unique NameGO241419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
GO241419_ssr92 microsatellite GO241419_ssr92:92..119. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7410 contig Csv1_Contig7410:107..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: AL2B4_ARATH (Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.283e-37
Identity = 73/94 (77.66%), Postives = 82/94 (87.23%), Query Frame = 2
Query:  332 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            LING FVD+ASGKTFP  DPRT EVIA+VAEGDAEDI RAV  AR AFDEGPWPKM+ YERSR++LR ADL+EK+ EELA+LETW+NGKPY QS
Sbjct:   61 LINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQS 154          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: AL2B7_ARATH (Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 5.841e-36
Identity = 71/94 (75.53%), Postives = 80/94 (85.11%), Query Frame = 2
Query:  332 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            LI G+FVDA SGKTFP  DPR  EVIA V+EGDAED+ RAVA ARKAFDEGPWPKMT YERS+I+ R ADLIEK+ +E+AALETW+NGKPY QS
Sbjct:   57 LIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQS 150          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.552e-25
Identity = 54/88 (61.36%), Postives = 68/88 (77.27%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGK 598
            INGQF+DAASGKTF   DPR  EVIA +AEGD ED+  AV  AR AFD GPWP+MT +ER++++ + ADLIE+N+EELA L+  + GK
Sbjct:   24 INGQFIDAASGKTFETIDPRNGEVIATIAEGDKEDVDLAVNAARYAFDHGPWPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGK 111          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: ALDH2_PONAB (Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.868e-20
Identity = 52/94 (55.32%), Postives = 63/94 (67.02%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+ +AV  AR AF  G PW +M    R R++ R ADLIE++   LAALET +NGKPYV S
Sbjct:   41 INNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS 134          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: ALDH2_HUMAN (Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 5.868e-20
Identity = 52/94 (55.32%), Postives = 63/94 (67.02%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+ +AV  AR AF  G PW +M    R R++ R ADLIE++   LAALET +NGKPYV S
Sbjct:   41 INNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS 134          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: ALDH2_PIG (Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.664e-20
Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            IN ++ DA S KTFP  +P T +VI +VAEGD ED+ RAV  AR AF  G PW ++   +R R++ R ADLIE++   LAALET +NGKPYV S
Sbjct:   45 INNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSPWRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS 138          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.664e-20
Identity = 51/94 (54.26%), Postives = 64/94 (68.09%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            IN ++ DA S KTFP  +P T EVI  VAEG+ ED+ +AV  AR AF  G PW +M   +R R++ R ADLIE++   LAALET +NGKPYV S
Sbjct:   43 INNEWHDAVSRKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVIS 136          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.664e-20
Identity = 52/94 (55.32%), Postives = 63/94 (67.02%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            IN ++ DA S KTFP  +P T EVI  VA GD ED+ RAV  AR AF  G PW +M   +R R++ R ADLIE++   LAALET +NGKPYV S
Sbjct:   24 INNEWHDAVSKKTFPTVNPSTGEVICQVAAGDKEDVDRAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS 117          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: ALDH2_BOVIN (Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 7.664e-20
Identity = 51/94 (54.26%), Postives = 64/94 (68.09%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            IN ++ DA S KTFP  +P T +VI +VAEGD  D+ RAV  AR AF  G PW +M   ER R++ R ADLIE++   LAALET +NGKPY+ S
Sbjct:   44 INNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIIS 137          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: ALDH2_MESAU (Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.707e-19
Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            IN ++ DA S KTFP  +P T EVI  VAEG  ED+ +AV  AR AF  G PW +M   +R R++ R ADLIE++   LAALET +NGKPYV S
Sbjct:   24 INNEWHDAVSKKTFPTVNPSTGEVICQVAEGSKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS 117          
The following BLAST results are available for this feature:
BLAST of GO241419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
AL2B4_ARATH5.283e-3777.66Aldehyde dehydrogenase family 2 member B4, mitocho... [more]
AL2B7_ARATH5.841e-3675.53Aldehyde dehydrogenase family 2 member B7, mitocho... [more]
AL2C4_ARATH3.552e-2561.36Aldehyde dehydrogenase family 2 member C4 OS=Arabi... [more]
ALDH2_PONAB5.868e-2055.32Aldehyde dehydrogenase, mitochondrial OS=Pongo abe... [more]
ALDH2_HUMAN5.868e-2055.32Aldehyde dehydrogenase, mitochondrial OS=Homo sapi... [more]
ALDH2_PIG7.664e-2054.26Aldehyde dehydrogenase, mitochondrial OS=Sus scrof... [more]
ALDH2_MOUSE7.664e-2054.26Aldehyde dehydrogenase, mitochondrial OS=Mus muscu... [more]
ALDH2_HORSE7.664e-2055.32Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]
ALDH2_BOVIN7.664e-2054.26Aldehyde dehydrogenase, mitochondrial OS=Bos tauru... [more]
ALDH2_MESAU1.707e-1954.26Aldehyde dehydrogenase, mitochondrial OS=Mesocrice... [more]

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Properties
Property NameValue
Genbank description67 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 151 5, mRNA sequence.