GO241418

Overview
NameGO241418
Unique NameGO241418
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of GO241418 vs. ExPASy Swiss-Prot
Match: SNF12_ARATH (SWI/SNF complex component SNF12 homolog OS=Arabidopsis thaliana GN=At5g14170 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.020e-42
Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 2 
Query:    2 NKEIDQCDEAICSAIRKIHEPRRRRAFFXGFSQSPVEFINPLIESQSKDLKLVAGEGSRSAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGS 289
            NKEI+ CDEAIC+AIRKIHE RRRRAFF GFSQSPVEFIN LIESQSKDLK+VAGE SR+AE+ERRSDFFNQPWVEDAVIRYLNR+PAAG+D PGS
Sbjct:  438 NKEIEACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSKDLKVVAGEASRNAERERRSDFFNQPWVEDAVIRYLNRRPAAGNDGPGS 533
The following BLAST results are available for this feature:
BLAST of GO241418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SNF12_ARATH1.020e-4286.46SWI/SNF complex component SNF12 homolog OS=Arabido... [more]
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Properties
Property NameValue
Genbank description66 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 150 5, mRNA sequence.