GO241415

Overview
NameGO241415
Unique NameGO241415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4590 contig Csv1_Contig4590:221..935. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241415 vs. ExPASy Swiss-Prot
Match: UMP3_ARATH (Uncharacterized protein At5g10860, mitochondrial OS=Arabidopsis thaliana GN=At5g10860 PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.313e-78
Identity = 144/162 (88.89%), Postives = 154/162 (95.06%), Query Frame = 1
Query:   10 ARMXEHGFESPXISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLREIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 495
            ARM E GFES  ISD++K+KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ+++AGIITERDYLR+IIVQGRSSKSTKVGDIMTEENKLITV+P+TKVLRAMQLMTDNRIRHIPVI DKGMIGMVSIGDVVRAVV EHREEL RLNA+IQGGY
Sbjct:   45 ARMEESGFESTTISDVMKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSIGDVVRAVVHEHREELQRLNAYIQGGY 206          
BLAST of GO241415 vs. ExPASy Swiss-Prot
Match: Y525_METKA (Uncharacterized protein MK0525 OS=Methanopyrus kandleri GN=MK0525 PE=4 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12
Identity = 44/140 (31.43%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  112 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLREIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRA-------------VVSEHREELNRLNAFIQG 489
            +T  +    M +H +G++V+V   E+    GIITERD + +++ QG++       DIM++   +ITV  D +V  A++LM D  IR +P++DD G +IG+V++ D+++                 E  EEL  ++  I+G
Sbjct:   21 ETAVEIAYKMREHGIGSVVIVN--EKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQP--VITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLVATIEEEMKKFQEELEELEEVSEIIEG 156          
BLAST of GO241415 vs. ExPASy Swiss-Prot
Match: YHCV_BACSU (CBS domain-containing protein yhcV OS=Bacillus subtilis GN=yhcV PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 38/106 (35.85%), Postives = 66/106 (62.26%), Query Frame = 1
Query:  109 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLREIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 426
            + T+ +A   M QHNVGA+ VV+ G  K   G++T+RD       QGR  + T V ++M+ E  L++ +P+  +  A QLM  ++IR +P++D   ++G+V++GD+
Sbjct:   18 NQTIQEAASLMKQHNVGAIPVVEQGVLK---GMLTDRDIALRTTAQGRDGQ-TPVSEVMSTE--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117          
BLAST of GO241415 vs. ExPASy Swiss-Prot
Match: YBP3_ACIAM (Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 47/128 (36.72%), Postives = 75/128 (58.59%), Query Frame = 1
Query:  115 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLREIIVQGRSSKS--TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 489
            T+ +A K M +HN+G+LVV+    Q  V GIITERD     IV+  S++   + V   MT++ K +T   DT+V  A+ +M +N  RH+P+I   G + G+VSI D+ RA++  H  +  +    ++G
Sbjct:   21 TIAEAAKEMKEHNLGSLVVID--SQNRVVGIITERD-----IVKAASNRDIDSPVEKYMTKDVKGVT--EDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGKPAEEVKG 139          
BLAST of GO241415 vs. ExPASy Swiss-Prot
Match: Y653_METJA (Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii GN=MJ0653 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 37/113 (32.74%), Postives = 68/113 (60.18%), Query Frame = 1
Query:  103 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLREIIVQGRSSKSTKVGDIMTEE---NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 432
            T + ++YD    MT++N+GA+V+V   E     GI+TERD ++ ++     SK+ K  D++ EE    K+IT+  +  +  A ++M  + I+ +PV+ D  ++G+V+  D+VR
Sbjct:   21 TKNMSIYDIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVV-----SKNLKPKDVLAEEVMSKKIITIPQNASITEAAKIMATHGIKRLPVVKDGELVGIVTQSDIVR 125          
BLAST of GO241415 vs. ExPASy Swiss-Prot
Match: YLBB_BACSU (Uncharacterized protein ylbB OS=Bacillus subtilis GN=ylbB PE=4 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 42/111 (37.84%), Postives = 66/111 (59.46%), Query Frame = 1
Query:   97 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY-LREIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 426
            +CT  D VY+A   M   NVGA+ VV   + +++ GI+T+RD  LR I +  +   S K+ D MTE  K ++V  D  V   + LM  +++R IPV  +K + G+V++GD+
Sbjct:   14 YCTVLDNVYEAAVKMKDANVGAIPVVDE-DGETLVGIVTDRDLVLRGIAI--KKPNSQKITDAMTE--KPVSVEEDASVDEVLHLMASHQLRRIPVTKNKKLTGIVTLGDL 119          
The following BLAST results are available for this feature:
BLAST of GO241415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
UMP3_ARATH6.313e-7888.89Uncharacterized protein At5g10860, mitochondrial O... [more]
Y525_METKA1.584e-1231.43Uncharacterized protein MK0525 OS=Methanopyrus kan... [more]
YHCV_BACSU2.702e-1235.85CBS domain-containing protein yhcV OS=Bacillus sub... [more]
YBP3_ACIAM2.702e-1236.72Uncharacterized 17.7 kDa protein in bps2 3'region ... [more]
Y653_METJA3.529e-1232.74Uncharacterized protein MJ0653 OS=Methanocaldococc... [more]
YLBB_BACSU2.987e-1137.84Uncharacterized protein ylbB OS=Bacillus subtilis ... [more]
back to top
Properties
Property NameValue
Genbank description63 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 147 5, mRNA sequence.