GE213395

Overview
NameGE213395
Unique NameGE213395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213395 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.875e-20
Identity = 58/148 (39.19%), Postives = 83/148 (56.08%), Query Frame = 2
Query:   23 YRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGVE 466
            Y+G F S +GV PYV +NF  YE+LK   I        +D+  +V   L              YP+D+IRRR+Q+ G        IG G++   + YNG  DAFRK +R EG   LY G++P  +KV+P+IS++F  YEV+K IL ++
Sbjct:  298 YKGLFASALGVAPYVAINFTTYENLKKTFIP-------KDTTPTVVQSLTFGAISGATAQTLTYPIDLIRRRLQVQG--------IG-GKD---ILYNGTFDAFRKIIRDEGVLGLYNGMIPCYLKVIPAISISFCVYEVMKKILKID 426          
BLAST of GE213395 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.064e-16
Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 2
Query:   23 YRGWFPSVIGVVPYVGLNFAVYESLK-VWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGVEIR 472
            Y+G+ P+++G++PY G++ AVYE+LK  WL +       E+++  V   L              YPL +IR RMQ     E SS V              M   F++ ++ EG   LY+GL PN +KV+P++S+++V YE +K  LGV  R
Sbjct:  336 YKGYVPNMLGIIPYAGIDLAVYETLKNTWLQRYG----TENADPGVFVLLACGTVSSTCGQLASYPLALIRTRMQAQASVEGSSQV-------------SMTGLFKQIMKTEGPTGLYRGLTPNFLKVIPAVSISYVVYEHIKSTLGVRSR 469          
BLAST of GE213395 vs. ExPASy Swiss-Prot
Match: SCM2B_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-B OS=Danio rerio GN=slc25a25b PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.899e-16
Identity = 51/151 (33.77%), Postives = 79/151 (52.32%), Query Frame = 2
Query:   23 YRGWFPSVIGVVPYVGLNFAVYESLK-VWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGVEIR 472
            Y+G+ P+++G++PY G++ AVYE+LK  WL +       + ++  V   L              YPL ++R RMQ    +E S  +   G              FR  VR EG   LY+GL PN +KV+P++S+++V YE +K  LGV+ R
Sbjct:  336 YKGYIPNMLGIIPYAGIDLAVYETLKNSWLQRFA----TDSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASQEGSPQMTMSG-------------LFRHIVRTEGAIGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR 469          
BLAST of GE213395 vs. ExPASy Swiss-Prot
Match: SCMC3_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.011e-16
Identity = 47/153 (30.72%), Postives = 76/153 (49.67%), Query Frame = 2
Query:   14 RPRYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGVEIR 472
            R  YRG+ P+V+G++PY G++ AVYE+LK W ++       + ++  +   L              YPL ++R RMQ     E    +              M+   R  +  EG   LY+G+ PN +KV+P++S+++V YE +K  LGV  R
Sbjct:  332 RAFYRGYLPNVLGIIPYAGIDLAVYETLKNWWLQQYS---HDSADPGILVLLACGTISSTCGQIASYPLALVRTRMQAQASIEGGPQL-------------SMLGLLRHILSQEGMRGLYRGIAPNFMKVIPAVSISYVVYENMKQALGVTSR 468          
BLAST of GE213395 vs. ExPASy Swiss-Prot
Match: MCFP_DICDI (Mitochondrial substrate carrier family protein P OS=Dictyostelium discoideum GN=mcfP PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.177e-15
Identity = 53/144 (36.81%), Postives = 81/144 (56.25%), Query Frame = 2
Query:   23 YRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLG-LAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKD 451
            YRG  P++IG++PY G++F+ +E LK    +  PL  + E+ ++S T +L              YP DV+RRR+Q  G+ +A +VV         LE+ G +      ++ EG  ALYKGL  N VKV+P+ S+AF TYE + +
Sbjct:  162 YRGIQPTLIGILPYGGISFSTFEFLK----RIAPLNEIDENGQISGTYKLIAGGIAGGVAQTVAYPFDVVRRRVQTHGFGDAKAVV--------NLEH-GTLRTIAHILKEEGILALYKGLSINYVKVIPTASIAFYTYEYLSN 292          
BLAST of GE213395 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.537e-15
Identity = 51/151 (33.77%), Postives = 82/151 (54.30%), Query Frame = 2
Query:   14 RPRYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAP-LEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGV 463
            R  Y+G+ P+++G++PY G++ A+YE+LK + ++       + +   V   L              YPL +IR RMQ      A + + G     AP L   G+   FRK V  EGF  LY+G+ PN +KV+P++S+++V YE +K  LG+
Sbjct:  340 RAFYKGYIPNILGIIPYAGIDLAIYETLKTFWLQNYA---TDSANPGVLVLLGCGTASSTCGQLASYPLALIRTRMQ------AQASIEG-----APQLNMGGL---FRKIVAKEGFFGLYRGIAPNFLKVLPAVSISYVVYEKMKIKLGI 473          
BLAST of GE213395 vs. ExPASy Swiss-Prot
Match: YP011_YEAST (Uncharacterized mitochondrial carrier YPR011C OS=Saccharomyces cerevisiae GN=YPR011C PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.622e-15
Identity = 54/146 (36.99%), Postives = 72/146 (49.32%), Query Frame = 2
Query:   14 RPRYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKD 451
            R  YRG +P+ +GVVPYV LNFAVYE L+ + + +     A+ S  S   +L              YP D++RRR Q          V+  G N     Y  + DA     R EG    YKGL  N  KVVPS +++++ YEVV D
Sbjct:  189 RGLYRGVWPTSLGVVPYVALNFAVYEQLREFGVNSSD---AQPSWKSNLYKLTIGAISGGVAQTITYPFDLLRRRFQ----------VLAMGGNELGFRYTSVWDALVTIGRAEGVSGYYKGLAANLFKVVPSTAVSWLVYEVVCD 321          
BLAST of GE213395 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.622e-15
Identity = 47/148 (31.76%), Postives = 77/148 (52.03%), Query Frame = 2
Query:   23 YRGWFPSVIGVVPYVGLNFAVYESLK-VWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGV 463
            Y+G+ P+++G++PY G++ AVYE+LK  WL         + +   V   L              YPL +IR RMQ +   E S  V              M    +K ++ EGF  LY+G++PN +KV+P++S+++V YE ++  LG+
Sbjct:  345 YKGYVPNILGIIPYAGIDLAVYETLKNTWLSHYAK----DTANPGVLVLLGCGTISSTCGQLASYPLALIRTRMQAMASMEGSEQV-------------SMSKLVKKIMQKEGFFGLYRGILPNFMKVIPAVSISYVVYEYMRSGLGI 475          
BLAST of GE213395 vs. ExPASy Swiss-Prot
Match: SCMC2_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Bos taurus GN=SLC25A25 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.424e-15
Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 2
Query:   23 YRGWFPSVIGVVPYVGLNFAVYESLK-VWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGVEIR 472
            Y+G+ P+++G++PY G++ AVYE+LK  WL +         ++  V   L              YPL ++R RMQ     E +  V              M   F++ +R EG   LY+GL PN +KV+P++S+++V YE +K  LGV+ R
Sbjct:  336 YKGYVPNMLGIIPYAGIDLAVYETLKNAWLQRYA----VNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASMEGAPEVT-------------MSSLFKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR 469          
BLAST of GE213395 vs. ExPASy Swiss-Prot
Match: SCMC3_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Mus musculus GN=Slc25a23 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.472e-15
Identity = 50/154 (32.47%), Postives = 75/154 (48.70%), Query Frame = 2
Query:   14 RPRYRGWFPSVIGVVPYVGLNFAVYESLKV-WLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGVEIR 472
            R  YRG+ P+V+G++PY G++ AVYE+LK  WL +       E +   +   L              YPL ++R RMQ     E    V              M+   R  +  EG   LY+G+ PN +KV+P++S+++V YE +K  LGV  R
Sbjct:  331 RAFYRGYLPNVLGIIPYAGIDLAVYETLKNRWLQQYSH----ESANPGILVLLGCGTISSTCGQIASYPLALVRTRMQAQASIEGGPQV-------------SMVGLLRHILSQEGVWGLYRGIAPNFMKVIPAVSISYVVYENMKQALGVTSR 467          
The following BLAST results are available for this feature:
BLAST of GE213395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
MCFB_DICDI7.875e-2039.19Mitochondrial substrate carrier family protein B O... [more]
SCM2A_DANRE1.064e-1634.44Calcium-binding mitochondrial carrier protein SCaM... [more]
SCM2B_DANRE6.899e-1633.77Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC3_HUMAN9.011e-1630.72Calcium-binding mitochondrial carrier protein SCaM... [more]
MCFP_DICDI1.177e-1536.81Mitochondrial substrate carrier family protein P O... [more]
SCMC1_XENTR1.537e-1533.77Calcium-binding mitochondrial carrier protein SCaM... [more]
YP011_YEAST2.622e-1536.99Uncharacterized mitochondrial carrier YPR011C OS=S... [more]
SCMC1_DANRE2.622e-1531.76Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC2_BOVIN3.424e-1532.45Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC3_MOUSE4.472e-1532.47Calcium-binding mitochondrial carrier protein SCaM... [more]

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Properties
Property NameValue
Genbank description265 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.