GE213329

Overview
NameGE213329
Unique NameGE213329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213329 vs. ExPASy Swiss-Prot
Match: GUN25_ARATH (Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.643e-48
Identity = 97/157 (61.78%), Postives = 113/157 (71.97%), Query Frame = 1
Query:   16 PGRYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTSAATTRTWGPSLWGK*GLASYLF*YSFCESC--KTDYSLGDSLNLPSRFQEKPPLPA 480
            PG YCGPNF+ST  LR+FA++QIDYILGKNPRKMSY+VGFG  YP+HVHHRGASIPKNK++YNCKGGWK RDS KPNPNT+ GA+VAGPDK DG+RDVR +   T    P+L G  GL + L   S  E    K D +   S  +P  F   PP PA
Sbjct:  465 PGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGYRDVRMNYNYTE---PTLAGNAGLVAALVALSGEEEATGKIDKNTIFSA-VPPLFPTPPPPPA 617          
BLAST of GE213329 vs. ExPASy Swiss-Prot
Match: GUN9_ORYSJ (Endoglucanase 9 OS=Oryza sativa subsp. japonica GN=GLU1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 4.609e-43
Identity = 88/155 (56.77%), Postives = 107/155 (69.03%), Query Frame = 1
Query:   16 PGRYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTSAATTRTWGPSLWGK*GLASYLF*YSFCESCKTDYSLGDSLNLPSRFQEKPPLPA 480
            PG YCGP+F+  +TLR FA+TQI+YILGKNP KMSY+VG+GN YPK VHHRGASIPKN + Y CKGGWK R++ KPNPN +VGA+VAGPD+HDGF+DVR +   T     +L G  GL + L   S  E    D +   S  +P  F   PP PA
Sbjct:  466 PGWYCGPHFYPIETLRNFARTQIEYILGKNPLKMSYVVGYGNRYPKRVHHRGASIPKNGVHYGCKGGWKWRETKKPNPNIIVGAMVAGPDRHDGFKDVRKNYNYTEA---TLAGNAGLVAALVALS-GEGHGVDKNTMFSA-VPPMFPSPPPPPA 615          
BLAST of GE213329 vs. ExPASy Swiss-Prot
Match: GUN10_ORYSJ (Endoglucanase 10 OS=Oryza sativa subsp. japonica GN=GLU2 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.655e-42
Identity = 76/122 (62.30%), Postives = 96/122 (78.69%), Query Frame = 1
Query:   16 PGRYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTSAATTRTWGPSLWGK*GLASYL 381
            PG YCGP F++T+ LR+FA++Q+DY+LGKNP KMSY+VGFGN YPK  HHRGASIP N ++Y CKGG+K R++ KPNPN L+GALVAGPD+HDGF+DVRT+   T    P+L    GL + L
Sbjct:  465 PGWYCGPTFYTTEVLRKFARSQLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNILIGALVAGPDRHDGFKDVRTNYNYTE---PTLAANAGLVAAL 583          
BLAST of GE213329 vs. ExPASy Swiss-Prot
Match: GUN21_ARATH (Endoglucanase 21 OS=Arabidopsis thaliana GN=KOR3 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.004e-38
Identity = 75/122 (61.48%), Postives = 93/122 (76.23%), Query Frame = 1
Query:   16 PGRYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTSAATTRTWGPSLWGK*GLASYL 381
            PG YCGPNF++T+ LR F+++QIDYILGKNPRKMSY+VG+G  YPK VHHRGASIPKN ++  C GG+K + S K NPN + GA+VAGPDKHDGF D+RT+   T    P+L G  GL + L
Sbjct:  466 PGWYCGPNFYTTEFLRNFSRSQIDYILGKNPRKMSYVVGYGQRYPKQVHHRGASIPKN-MKETCTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTE---PTLAGNAGLVAAL 583          
BLAST of GE213329 vs. ExPASy Swiss-Prot
Match: GUN12_ORYSJ (Endoglucanase 12 OS=Oryza sativa subsp. japonica GN=GLU3 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 2.994e-34
Identity = 66/122 (54.10%), Postives = 87/122 (71.31%), Query Frame = 1
Query:   16 PGRYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTSAATTRTWGPSLWGK*GLASYL 381
            PG YCGP F + D LR FA++Q++YILG NP+KMSY+VG+G  YP+ +HHRGAS P N I+Y+C GG+K RD+   +PN LVGA+V GPDK+D F+D R + A      P+L G  GL + L
Sbjct:  465 PGWYCGPYFMTVDDLRSFARSQVNYILGDNPKKMSYVVGYGKKYPRRLHHRGASTPHNGIKYSCTGGYKWRDTKGADPNVLVGAMVGGPDKNDQFKDARLTYAQNE---PTLVGNAGLVAAL 583          
BLAST of GE213329 vs. ExPASy Swiss-Prot
Match: GUN7_ARATH (Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 5.647e-33
Identity = 71/157 (45.22%), Postives = 95/157 (60.51%), Query Frame = 1
Query:    4 SSGRPGRYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTSAATTRTWGPSLWGK*GLASYLF*YSFCESCKTDYSLGDSLNLPSRFQEKPPL 474
            S+G PG YCGP F     L++FA++QIDYILG NP KMSY+VGFG  +P+ VHHRGA+IP +K R +C+ G K RD+  PNPN + GA+V GP+K D F D+R +   +    P+L G  GL + L             S G  ++  + F   PPL
Sbjct:  465 STGVPGWYCGPTFVENHVLKDFAQSQIDYILGDNPLKMSYVVGFGKKFPRRVHHRGATIPNDKKRRSCREGLKYRDTKNPNPNNITGAMVGGPNKFDEFHDLRNNYNASE---PTLSGNAGLVAAL--------VSLTSSGGQQIDKNTMFNSVPPL 610          
BLAST of GE213329 vs. ExPASy Swiss-Prot
Match: GUN_PHAVU (Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.945e-25
Identity = 55/103 (53.40%), Postives = 71/103 (68.93%), Query Frame = 1
Query:   19 GRYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKI---RYNCKGGWK-LRDSSKPNPNTLVGALVAGPDKHDGFRDVRT 315
            G  CG + F+   +R FAKTQ++YILGKNP KMSY+VGFG+ YPK +HHRG+SIP  K+   +  C  G     +S+ PNPNT VGA+V GPD +D F D R+
Sbjct:  368 GINCGSSHFTASQIRGFAKTQVEYILGKNPMKMSYMVGFGSKYPKQLHHRGSSIPSIKVHPAKVGCNAGLSDYYNSANPNPNTHVGAIVGGPDSNDRFNDARS 470          
BLAST of GE213329 vs. ExPASy Swiss-Prot
Match: GUN1_PERAE (Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 8.173e-24
Identity = 51/100 (51.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query:   28 CGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYN---CKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTS 318
            CG    +   L   AK Q+DYILG+NP KMSY+VGFG  YP+HVHHRG+S+P  ++  N   C  G++   SS PNPN LVGA++ GPD  D F D R +
Sbjct:  367 CGTTTVTAKNLISLAKKQVDYILGQNPAKMSYMVGFGERYPQHVHHRGSSLPSVQVHPNSIPCNAGFQYLYSSPPNPNILVGAILGGPDNRDSFSDDRNN 466          
BLAST of GE213329 vs. ExPASy Swiss-Prot
Match: GUN1_ARATH (Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 8.173e-24
Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 1
Query:    1 ISSGRPGRYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPK---NKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRT 315
            ++S R   YCG +  +   LR  AK Q+DY+LG NP KMSY+VG+G  YP+ +HHRG+S+P    +  R  C  G+ L  S  PNPN LVGA+V GPD++D F D R+
Sbjct:  369 LTSARTVAYCGGSVVTPARLRSIAKKQVDYLLGGNPLKMSYMVGYGLKYPRRIHHRGSSLPSVAVHPTRIQCHDGFSLFTSQSPNPNDLVGAVVGGPDQNDQFPDERS 476          
BLAST of GE213329 vs. ExPASy Swiss-Prot
Match: GUN2_ARATH (Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g19940 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.821e-23
Identity = 53/107 (49.53%), Postives = 69/107 (64.49%), Query Frame = 1
Query:    1 ISSGRPGRYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTSA 321
            ++SG     C    F    LR+FA++Q DY+LGKNP KMSY+VG+G  YP+ VHHRGASIP +     CK G+K  +S +PNPN   GALV GP  +D F D R ++
Sbjct:  380 LTSGVKELSCSDQSFKPSDLRKFARSQADYMLGKNPEKMSYLVGYGEKYPEFVHHRGASIPADATT-GCKDGFKWLNSDEPNPNVAYGALVGGPFLNDTFIDARNNS 485          
The following BLAST results are available for this feature:
BLAST of GE213329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
GUN25_ARATH3.643e-4861.78Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE... [more]
GUN9_ORYSJ4.609e-4356.77Endoglucanase 9 OS=Oryza sativa subsp. japonica GN... [more]
GUN10_ORYSJ6.655e-4262.30Endoglucanase 10 OS=Oryza sativa subsp. japonica G... [more]
GUN21_ARATH2.004e-3861.48Endoglucanase 21 OS=Arabidopsis thaliana GN=KOR3 P... [more]
GUN12_ORYSJ2.994e-3454.10Endoglucanase 12 OS=Oryza sativa subsp. japonica G... [more]
GUN7_ARATH5.647e-3345.22Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE... [more]
GUN_PHAVU1.945e-2553.40Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2[more]
GUN1_PERAE8.173e-2451.00Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 S... [more]
GUN1_ARATH8.173e-2448.15Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE... [more]
GUN2_ARATH1.821e-2349.53Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g199... [more]

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Properties
Property NameValue
Genbank description187 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.