GE213322

Overview
NameGE213322
Unique NameGE213322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213322 vs. ExPASy Swiss-Prot
Match: Y8359_ORYSJ (Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica GN=Os08g0359500 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.243e-16
Identity = 39/74 (52.70%), Postives = 54/74 (72.97%), Query Frame = 1
Query:   28 DKVDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDNKPPADMDFGDLDFS 249
            DKV+V ESK SVG+R+I  +V+KAE KWW +L++   K P F+KVDWDKW+DED++G      AD++   +DFS
Sbjct:   59 DKVNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDG------ADVNVDGMDFS 126          
BLAST of GE213322 vs. ExPASy Swiss-Prot
Match: Y8359_ORYSI (Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica GN=OsI_027940 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.243e-16
Identity = 39/74 (52.70%), Postives = 54/74 (72.97%), Query Frame = 1
Query:   28 DKVDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDNKPPADMDFGDLDFS 249
            DKV+V ESK SVG+R+I  +V+KAE KWW +L++   K P F+KVDWDKW+DED++G      AD++   +DFS
Sbjct:   59 DKVNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDG------ADVNVDGMDFS 126          
BLAST of GE213322 vs. ExPASy Swiss-Prot
Match: Y3377_ARATH (Uncharacterized protein At3g03773 OS=Arabidopsis thaliana GN=At3g03773 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.410e-11
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 1
Query:   25 YDKVDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEE 195
            Y K+ + E + +VGLRNI + ++K E  WW+RLLK   KP  ++KVDW+KW DEDEE
Sbjct:   57 YGKI-MTEYRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE 112          
The following BLAST results are available for this feature:
BLAST of GE213322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y8359_ORYSJ3.243e-1652.70Uncharacterized protein Os08g0359500 OS=Oryza sati... [more]
Y8359_ORYSI3.243e-1652.70Uncharacterized protein OsI_027940 OS=Oryza sativa... [more]
Y3377_ARATH1.410e-1152.63Uncharacterized protein At3g03773 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank description179 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.