FC871653

Overview
NameFC871653
Unique NameFC871653
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC871653_ssr400 microsatellite FC871653_ssr400:400..415. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6625 contig Csv1_Contig6625:3..731. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871653 vs. ExPASy Swiss-Prot
Match: MTNK_ERWCT (Methylthioribose kinase OS=Erwinia carotovora subsp. atroseptica GN=mtnK PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.004e-15
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 3
Query:  114 LYHRFCERAQALIHGDLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDG-----HAAEGNDRKV 329
            L HRF  +A+AL+HGD+H+GS+ V     +VID EF FYGPMGFDIG  +GNL+L +    G      AA G +R++
Sbjct:  214 LKHRFLSKAEALLHGDIHSGSIFVAEGRLKVIDAEFGFYGPMGFDIGTAIGNLLLNYCGLPGLLAPREAAAGRERRL 290          
BLAST of FC871653 vs. ExPASy Swiss-Prot
Match: MTNK_ENT38 (Methylthioribose kinase OS=Enterobacter sp. (strain 638) GN=mtnK PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.338e-14
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 3
Query:  114 LYHRFCERAQALIHGDLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDGH 302
            L HRF  +A+AL+HGD+H+GS+ V  +S + ID EF +YGP+GFDIG  +GNL+L F    GH
Sbjct:  214 LKHRFFSQAEALLHGDIHSGSIFVAEDSLKAIDAEFGYYGPIGFDIGTAIGNLLLNFCGLPGH 276          
BLAST of FC871653 vs. ExPASy Swiss-Prot
Match: MTNK_BACSU (Methylthioribose kinase OS=Bacillus subtilis GN=mtnK PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.338e-14
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 3
Query:  126 FCERAQALIHGDLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDG 299
            F   A+ LIHGDLHTGS+  + + T+VIDPEFAFYGP+GFD+G F+ NL L   ++DG
Sbjct:  222 FLTSAETLIHGDLHTGSIFASEHETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDG 279          
BLAST of FC871653 vs. ExPASy Swiss-Prot
Match: MTNK_ERWT9 (Methylthioribose kinase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=mtnK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14
Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 3
Query:  114 LYHRFCERAQALIHGDLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLILAFFAQDG-----HAAEGNDRKV 329
            L HRF   A+AL+HGD+H+GS+ V   S +VID EF FYGP+GFDIG+ +GNL++++ A  G      AA+  ++++
Sbjct:  214 LKHRFYSNAEALLHGDVHSGSIFVAEGSLKVIDAEFGFYGPIGFDIGSALGNLLISYCAAPGLLPPREAADAREKRL 290          
BLAST of FC871653 vs. ExPASy Swiss-Prot
Match: MTNK_BACWK (Methylthioribose kinase OS=Bacillus weihenstephanensis (strain KBAB4) GN=mtnK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 3
Query:  120 HRFCERAQALIHGDLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLIL 278
            ++F  R +ALIHGDLHTGS+  +P+ T+VIDPEFA YGP GFDIG F+ NL+L
Sbjct:  212 YKFLTRKEALIHGDLHTGSIFSSPSETKVIDPEFATYGPFGFDIGQFIANLLL 264          
BLAST of FC871653 vs. ExPASy Swiss-Prot
Match: MTNK_BACHK (Methylthioribose kinase OS=Bacillus thuringiensis subsp. konkukian GN=mtnK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 3
Query:  120 HRFCERAQALIHGDLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLIL 278
            ++F  R +ALIHGDLHTGS+  +P+ T+VIDPEFA YGP GFDIG F+ NL+L
Sbjct:  212 YKFLTRKEALIHGDLHTGSIFSSPSETKVIDPEFATYGPFGFDIGQFIANLLL 264          
BLAST of FC871653 vs. ExPASy Swiss-Prot
Match: MTNK_BACCZ (Methylthioribose kinase OS=Bacillus cereus (strain ZK / E33L) GN=mtnK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 3
Query:  120 HRFCERAQALIHGDLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLIL 278
            ++F  R +ALIHGDLHTGS+  +P+ T+VIDPEFA YGP GFDIG F+ NL+L
Sbjct:  212 YKFLTRKEALIHGDLHTGSIFSSPSETKVIDPEFATYGPFGFDIGQFIANLLL 264          
BLAST of FC871653 vs. ExPASy Swiss-Prot
Match: MTNK_BACCQ (Methylthioribose kinase OS=Bacillus cereus (strain Q1) GN=mtnK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 3
Query:  120 HRFCERAQALIHGDLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLIL 278
            ++F  R +ALIHGDLHTGS+  +P+ T+VIDPEFA YGP GFDIG F+ NL+L
Sbjct:  212 YKFLTRKEALIHGDLHTGSIFSSPSETKVIDPEFATYGPFGFDIGQFIANLLL 264          
BLAST of FC871653 vs. ExPASy Swiss-Prot
Match: MTNK_BACC7 (Methylthioribose kinase OS=Bacillus cereus (strain AH187) GN=mtnK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 3
Query:  120 HRFCERAQALIHGDLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLIL 278
            ++F  R +ALIHGDLHTGS+  +P+ T+VIDPEFA YGP GFDIG F+ NL+L
Sbjct:  212 YKFLTRKEALIHGDLHTGSIFSSPSETKVIDPEFATYGPFGFDIGQFIANLLL 264          
BLAST of FC871653 vs. ExPASy Swiss-Prot
Match: MTNK_BACC3 (Methylthioribose kinase OS=Bacillus cereus (strain 03BB102) GN=mtnK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 3
Query:  120 HRFCERAQALIHGDLHTGSVMVTPNSTQVIDPEFAFYGPMGFDIGAFVGNLIL 278
            ++F  R +ALIHGDLHTGS+  +P+ T+VIDPEFA YGP GFDIG F+ NL+L
Sbjct:  212 YKFLTRKEALIHGDLHTGSIFSSPSETKVIDPEFATYGPFGFDIGQFIANLLL 264          
The following BLAST results are available for this feature:
BLAST of FC871653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
MTNK_ERWCT6.004e-1549.35Methylthioribose kinase OS=Erwinia carotovora subs... [more]
MTNK_ENT381.338e-1453.97Methylthioribose kinase OS=Enterobacter sp. (strai... [more]
MTNK_BACSU1.338e-1458.62Methylthioribose kinase OS=Bacillus subtilis GN=mt... [more]
MTNK_ERWT91.747e-1446.75Methylthioribose kinase OS=Erwinia tasmaniensis (s... [more]
MTNK_BACWK1.747e-1464.15Methylthioribose kinase OS=Bacillus weihenstephane... [more]
MTNK_BACHK1.747e-1464.15Methylthioribose kinase OS=Bacillus thuringiensis ... [more]
MTNK_BACCZ1.747e-1464.15Methylthioribose kinase OS=Bacillus cereus (strain... [more]
MTNK_BACCQ1.747e-1464.15Methylthioribose kinase OS=Bacillus cereus (strain... [more]
MTNK_BACC71.747e-1464.15Methylthioribose kinase OS=Bacillus cereus (strain... [more]
MTNK_BACC31.747e-1464.15Methylthioribose kinase OS=Bacillus cereus (strain... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3AE04FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3AE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871653 ID=FC871653; Name=FC871653; organism=Citrus sinensis; type=EST; length=729bp
TGCTGGGTTGAAATCCATGTAATAATATTTTTTCTTCCTCAGTACTGTTT
CGTTTCCTAGTGCATAGAAACTCTTTCTTTTTAAAATTTTCCTTTATAAT
ATATCAAAGCTTCCTTTACCATAGGTTCTGTGAAAGAGCACAAGCCCTGA
TACATGGAGATCTCCACACTGGCTCTGTTATGGTCACTCCTAATTCAACT
CAGGTTATAGATCCAGAATTTGCATTTTATGGACCAATGGGTTTTGACAT
TGGAGCTTTTGTTGGAAACTTGATTTTGGCCTTTTTTGCCCAAGATGGAC
ATGCTGCTGAAGGGAATGACAGGAAAGTATGTCTCTGTATCGTTCTTTCT
TCTCTCTGCTTTCATTCTCTGTTTCTCTTTTCTTCCTATTGGGTCTCATT
CTGTCTGTCTGTCTGTTTGTACCACCCCCACCTTCCCCCCCCCCCCGGGG
CGGGGGTTTTTGGTTCCTTATGACCATCTTCTTCAGGTTATAGTATTAGC
ACGTAAAAAAAAAAAGAATAAAAAAGGACAGTCAAATTGCATAACTCATA
CTATCTTCAGGCGACAAAATATATTTCTAGCTGAAGGTGCACAAATCGCA
TCAAGAGAAGGCGTCAAAACACAGGAAAATGAGTTTAAACCTCTGCTGGA
GTATAAGGAGTGGATTTTGAGGACAATTGAAGAGACTTGGACTCTGTTCC
ACCAGAAATTCACTGCACTTTGGCATCAA
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