FC871645

Overview
NameFC871645
Unique NameFC871645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC871645 vs. ExPASy Swiss-Prot
Match: MDARP_ARATH (Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 3.787e-19
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 3 
Query:  159 AGKLKGVLVESGSPEEFQLLPTLARSQPFVDKAKLQQASSV 281
            +G+LKGVLVESGSPEEFQLLP LARSQP VDKAKL  ASSV
Sbjct:  440 SGRLKGVLVESGSPEEFQLLPKLARSQPLVDKAKLASASSV 480

HSP 2 Score: 44.2838 bits (103), Expect = 3.787e-19
Identity = 17/20 (85.00%), Postives = 20/20 (100.00%), Query Frame = 2 
Query:    2 ETIEIGNFDPKIATFWIDSG 61
            ET+E+GNFDPKIATFWI+SG
Sbjct:  422 ETVEVGNFDPKIATFWIESG 441
The following BLAST results are available for this feature:
BLAST of FC871645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MDARP_ARATH3.787e-1985.37Monodehydroascorbate reductase, chloroplastic OS=A... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAK1BH03FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1BH03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871645 ID=FC871645; Name=FC871645; organism=Citrus sinensis; type=EST; length=665bp
AGAGACAATTGAAATTGGAAATTTTGATCCTAAAATTGCCACTTTCTGGA
TAGATTCTGGTAGTCAGATTATAGCCTTTACTTGCTTTCTCTCTTTTACT
TCATCTTGCTTTGTCCTGTTTCTAGTAAAACAGATGGTTAATTCATTGTT
GCTGCCCCGCAGGTAAATTGAAAGGAGTCCTTGTAGAAAGTGGGAGTCCT
GAGGAATTCCAACTCCTCCCTACTCTTGCGAGGAGTCAGCCTTTTGTTGA
CAAAGCAAAACTTCAACAAGCATCTTCAGTTGAGGAGGCACTGGAAATTG
CTCGGGCTGCCCTACCAGCGGAGGCTGCAGTTTAGACCAGTATTGATTCT
TGAAGTTTCCAGTCATCCCTCAGATATTTTGTTTATGATTTCTTTGTCAA
TAATCTCGATTCCAGGGGTTTATTTCTTGTTACCAAATCCTGGATCTTCA
CTGTTGTATATTAATAGGAGAATGATGAACATTATGCAGATATTAGAGAG
AAAGAGGGACTTTAATGGGTACACCTCGATTTTCAGGTTGTAGATTGGTT
TTGGATTTGGAGTTTGGACATCGTCCTGTTATGATTATCTACTTAATGCG
TATGATTGATGGACCATAGTGTTCATCCCTCGATGCTAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
back to top