FC871594

Overview
NameFC871594
Unique NameFC871594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC871594_ssr6 microsatellite FC871594_ssr6:6..21. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5333 contig Csv1_Contig5333:750..1556. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871594 vs. ExPASy Swiss-Prot
Match: P2C44_ORYSJ (Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 6.146e-75
Identity = 135/171 (78.95%), Postives = 154/171 (90.06%), Query Frame = 2
Query:  299 NKVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHA--ERRRIEKQGGFVTSLPGDVPRVNGQLAVAR 805
            NKV+HG+HLVEG+SGHDMEDY VAEY+  K+H LGLFAIFDGHLGD VP+YLK NLF NIL+E  FW +P+ AI NAYRST+++ILEN+ QLGPGGSTAVTAIV+DGKD+WVANVGDSRAVVCERG+ANQ+TVDHEPH   ER+RIEKQGGFVT+ PGDVPRVNGQLAVAR
Sbjct:   67 NKVTHGFHLVEGKSGHDMEDYHVAEYKYDKSHELGLFAIFDGHLGDSVPSYLKANLFCNILKEPIFWTNPQEAIKNAYRSTNKYILENAKQLGPGGSTAVTAIVVDGKDMWVANVGDSRAVVCERGAANQLTVDHEPHTTNERQRIEKQGGFVTTFPGDVPRVNGQLAVAR 237          
BLAST of FC871594 vs. ExPASy Swiss-Prot
Match: P2C58_ARATH (Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.826e-58
Identity = 106/167 (63.47%), Postives = 137/167 (82.04%), Query Frame = 2
Query:  305 VSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQLAVAR 805
            ++HG+H V+G+S H MEDY+V+E++K + H LGLFAIFDGHLG  V  YL+ NLF+NIL+E +FW D + AI NAYRSTD  IL+ S++LG GGSTAVT I+IDGK L VANVGDSRAV+ + G A+Q++VDHEP  E++ IE +GGFV+++PGDVPRV+GQLAVAR
Sbjct:   34 ITHGFHCVKGKSSHPMEDYVVSEFKKLEGHELGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDTENAIRNAYRSTDAVILQQSLKLGKGGSTAVTGILIDGKKLVVANVGDSRAVMSKNGVAHQLSVDHEPSKEKKEIESRGGFVSNIPGDVPRVDGQLAVAR 200          
BLAST of FC871594 vs. ExPASy Swiss-Prot
Match: P2C20_ARATH (Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3)

HSP 1 Score: 221.476 bits (563), Expect = 4.425e-57
Identity = 106/167 (63.47%), Postives = 135/167 (80.84%), Query Frame = 2
Query:  305 VSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQLAVAR 805
            ++HGY  V+G++GH MEDY+V+E++K   H LGLFAIFDGHLG  V  YL+ NLF+NIL+E +FW D K AI NAY STD  ILE S++LG GGSTAVT I+IDGK L +ANVGDSRAV+ + G A+Q++VDHEP  E++ IE +GGFV+++PGDVPRV+GQLAVAR
Sbjct:   30 IAHGYDFVKGKAGHPMEDYVVSEFKKVDGHDLGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDTKNAIRNAYISTDAVILEQSLKLGKGGSTAVTGILIDGKTLVIANVGDSRAVMSKNGVASQLSVDHEPSKEQKEIESRGGFVSNIPGDVPRVDGQLAVAR 196          
BLAST of FC871594 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.892e-56
Identity = 109/171 (63.74%), Postives = 138/171 (80.70%), Query Frame = 2
Query:  302 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVIDGK---DLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQLAVAR 805
            +V HGYHLV+G+S H MEDYLVAEYR++  H LGLFAIFDGHLG  VP +L+ +LF+NIL++  F  +P+AAI NAY+ TD  ILE++ +LG GGSTAVTAI+I  +   +L VANVGDSRAV+ + G A Q++VDHEP+ ER  IEK+GGFV++LPGDVPRV+GQLAVAR
Sbjct:   36 RVKHGYHLVKGKSNHPMEDYLVAEYRQEGEHDLGLFAIFDGHLGHTVPDFLRSHLFDNILKQPEFLSNPQAAIRNAYQLTDAKILESAAELGRGGSTAVTAILISSENSVNLVVANVGDSRAVISKSGVAKQLSVDHEPNKERHSIEKKGGFVSNLPGDVPRVDGQLAVAR 206          
BLAST of FC871594 vs. ExPASy Swiss-Prot
Match: P2C09_ARATH (Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 9.226e-55
Identity = 100/167 (59.88%), Postives = 128/167 (76.65%), Query Frame = 2
Query:  305 VSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQLAVAR 805
            + +G+ LV+G++ H MEDY VA +   ++H LGLFAI+DGH+GD VP YL+  LF+NIL+E  FW DP+ +I  AY  TDQ IL NS  LG GGSTAVTAI+I+G+ LW+ANVGDSRAV+   G+  Q++ DHEP  ER  IE +GGFV++LPGDVPRVNGQLAV+R
Sbjct:   32 IKYGFSLVKGKANHPMEDYHVANFINIQDHELGLFAIYDGHMGDSVPAYLQKRLFSNILKEGEFWVDPRRSIAKAYEKTDQAILSNSSDLGRGGSTAVTAILINGRKLWIANVGDSRAVLSHGGAITQMSTDHEPRTERSSIEDRGGFVSNLPGDVPRVNGQLAVSR 198          
BLAST of FC871594 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.272e-53
Identity = 101/168 (60.12%), Postives = 132/168 (78.57%), Query Frame = 2
Query:  302 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQLAVAR 805
            ++  GY LV+G++ H MEDY V+++ K   + LGLFAI+DGHLG+RVP YL+ +LF+NIL+E  F  DP+ +I  AY  TDQ IL +S  LG GGSTAVTAI+++G+ LWVANVGDSRAV+ + G A Q+T+DHEPH ER  IE +GGFV+++PGDVPRVNGQLAV+R
Sbjct:   32 EIKFGYSLVKGKANHPMEDYHVSKFVKIDGNELGLFAIYDGHLGERVPAYLQKHLFSNILKEEQFRYDPQRSIIAAYEKTDQAILSHSSDLGRGGSTAVTAILMNGRRLWVANVGDSRAVLSQGGQAIQMTIDHEPHTERLSIEGKGGFVSNMPGDVPRVNGQLAVSR 199          
BLAST of FC871594 vs. ExPASy Swiss-Prot
Match: P2C39_ARATH (Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.473e-52
Identity = 97/168 (57.74%), Postives = 133/168 (79.17%), Query Frame = 2
Query:  302 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQLAVAR 805
            +++HG+HLV+G++ H+MEDY+VA++++  ++ LGLFAIFDGHL   +P YL  +LF NIL+E NFW++P+ AI  AY  TD  IL+ +  LG GGSTAVTAI+I+ + L VANVGDSRAV+C+ G A  ++VDHEP+ E+  IE +GGFV++ PGDVPRV+GQLAVAR
Sbjct:   39 QITHGFHLVKGKAFHEMEDYVVAKFKEVDDNELGLFAIFDGHLSHEIPDYLCSHLFENILKEPNFWQEPEKAIKKAYYITDTTILDKADDLGKGGSTAVTAILINCQKLVVANVGDSRAVICQNGVAKPLSVDHEPNMEKDEIENRGGFVSNFPGDVPRVDGQLAVAR 206          
BLAST of FC871594 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 3.281e-52
Identity = 101/168 (60.12%), Postives = 126/168 (75.00%), Query Frame = 2
Query:  302 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQLAVAR 805
            KVS+G++LV G + H MEDY VAE  ++K + LGLFAIFDGHLGD VP YL+ NLF NIL E  F   P  AI  AY  TDQ IL ++  LG GGSTAVTAI+++G+ LWVANVGDSRAV+ + G   Q++ DH+P+ ER  IE +GGFV+++PGDVPRV GQLAV+R
Sbjct:   33 KVSYGFYLVRGMTNHPMEDYHVAELAEEKGNELGLFAIFDGHLGDTVPAYLQKNLFANILNEEEFLTQPDRAIIKAYEKTDQAILSHTPDLGQGGSTAVTAILLNGRKLWVANVGDSRAVLLKGGRPIQMSTDHDPNVERSAIENRGGFVSNMPGDVPRVCGQLAVSR 200          
BLAST of FC871594 vs. ExPASy Swiss-Prot
Match: P2C17_ARATH (Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.565e-49
Identity = 98/170 (57.65%), Postives = 125/170 (73.53%), Query Frame = 2
Query:  305 VSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFIL-ENSMQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEP--HAERRRIEKQGGFVTSLPGDVPRVNGQLAVAR 805
            + +G+ L++G+S H MEDY VA++     + LGLFAIFDGH GD V  YL+ +LF+NIL++  F  DP+ AI  AY +TDQ IL +N   L  GGSTAVTAI+I+GK LW+ANVGDSRA+V  RG A Q++VDH+P    ER  IE +GGFVT+ PGDVPRVNG LAV+R
Sbjct:   31 IKYGFSLIKGKSNHSMEDYHVAKFTNFNGNELGLFAIFDGHKGDHVAAYLQKHLFSNILKDGEFLVDPRRAIAKAYENTDQKILADNRTDLESGGSTAVTAILINGKALWIANVGDSRAIVSSRGKAKQMSVDHDPDDDTERSMIESKGGFVTNRPGDVPRVNGLLAVSR 200          
BLAST of FC871594 vs. ExPASy Swiss-Prot
Match: P2C28_ARATH (Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.610e-44
Identity = 91/154 (59.09%), Postives = 118/154 (76.62%), Query Frame = 2
Query:  350 MEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILENSMQLGP-GGSTAVTAIVIDGKDLWVANVGDSRAVVC-ERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQLAVAR 805
            MED++VA+ +  K H LGL+AIFDGH G  V  YL+++LF+NIL + +FW++PK AI  AY+STD +IL+N   +GP GGSTAVTAIVIDGK + VANVGDSRA++C E     QITVDHEP  ER  ++ +GGFV+  PG+VPRV+GQLA+ R
Sbjct:    1 MEDFIVADTKTVKGHNLGLYAIFDGHSGSDVADYLQNHLFDNILSQPDFWRNPKKAIKRAYKSTDDYILQN--VVGPRGGSTAVTAIVIDGKKIVVANVGDSRAILCRESDVVKQITVDHEPDKERDLVKSKGGFVSQKPGNVPRVDGQLAMTR 152          
The following BLAST results are available for this feature:
BLAST of FC871594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
P2C44_ORYSJ6.146e-7578.95Probable protein phosphatase 2C 44 OS=Oryza sativa... [more]
P2C58_ARATH6.826e-5863.47Probable protein phosphatase 2C 58 OS=Arabidopsis ... [more]
P2C20_ARATH4.425e-5763.47Probable protein phosphatase 2C 20 OS=Arabidopsis ... [more]
P2C62_ORYSJ4.892e-5663.74Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
P2C09_ARATH9.226e-5559.88Probable protein phosphatase 2C 9 OS=Arabidopsis t... [more]
P2C10_ARATH2.272e-5360.12Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]
P2C39_ARATH1.473e-5257.74Probable protein phosphatase 2C 39 OS=Arabidopsis ... [more]
P2C41_ORYSJ3.281e-5260.12Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]
P2C17_ARATH7.565e-4957.65Probable protein phosphatase 2C 17 OS=Arabidopsis ... [more]
P2C28_ARATH5.610e-4459.09Probable protein phosphatase 2C 28 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1BE09FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1BE09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871594 ID=FC871594; Name=FC871594; organism=Citrus sinensis; type=EST; length=807bp
GATTATTGCTTGCTTGCTTGCTGATCCGACTAAACTTATCAAATTCCTAC
AATTTTTTTTTCCCGATTGATTCTTATTATTGCTGCTGATTGCTGATATA
TACTGGATATTCGGAGAAAAAAAAAAGTGGAAGCACGGACTCGTCGTATG
AGTGTTTTCAGAGATGATGAGTAAGCACCCCGCAGCAAGTGTTTCTCGCT
CCAATAATAGTACGGGTTTTTTTTCCAAGATCAAGAATTCTACTTGTTTT
AGTTCATCATCATCCGACACTGGAAAAGGAAGAAGTAAGTCGTCAAGTAA
CAAAGTATCTCATGGATATCACTTAGTAGAAGGCCAATCTGGTCATGATA
TGGAAGACTACCTTGTTGCCGAATACAGAAAAAAGAAGAATCATGTGCTT
GGTCTATTTGCTATCTTCGATGGCCATCTTGGGGATCGTGTACCTACTTA
TTTGAAAGATAACCTTTTCAACAACATACTTGAAGAGTCAAATTTCTGGA
AAGACCCTAAGGCAGCAATAACAAATGCTTACCGCTCCACAGATCAGTTT
ATACTGGAAAACTCTATGCAATTAGGGCCTGGTGGATCAACTGCAGTTAC
TGCAATTGTTATTGATGGCAAAGATCTATGGGTGGCAAACGTTGGTGACT
CAAGAGCTGTTGTGTGTGAAAGGGGCTCTGCCAATCAAATAACTGTGGAC
CATGAGCCTCATGCTGAGCGAAGAAGGATTGAGAAGCAGGGTGGCTTTGT
GACTTCTCTTCCCGGTGACGTGCCCAGAGTTAATGGTCAACTTGCTGTTG
CACGTGC
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