FC871587

Overview
NameFC871587
Unique NameFC871587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3761 contig Csv1_Contig3761:1..770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC871587 vs. ExPASy Swiss-Prot
Match: DNAJ_CARHZ (Chaperone protein dnaJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.468e-11
Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 2 
Query:  263 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDE 454
            DYY +LG+  +ATPE+IKKAY    +  HPD++ DDP        INE Y VLSDP +R  YD+
Sbjct:    4 DYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRARYDQ 67
The following BLAST results are available for this feature:
BLAST of FC871587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DNAJ_CARHZ4.468e-1150.00Chaperone protein dnaJ OS=Carboxydothermus hydroge... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK3AA12FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871587 ID=FC871587; Name=FC871587; organism=Citrus sinensis; type=EST; length=770bp
TTTTAAGTTAGCTCTATCTCTGTGCCTGGTTCCTTTGCTTGCTTGAACAA
CAATGGCTGCTCAGTTACTCACTCCTGTTTGCATTGATGTTCTCAAACTT
CAAAACCCATCATTGAATAGTTTCAGCTCAAGAAGTTCATGGCGCTTGCT
GGATAATAACAGCAGCAGTTTGAGCTTGATGGGTCACAGTAGCAAGAGAA
GAAGCTGTGGCAGAGCGAGGGTTACCGCAGAGGACTCTGCTTCAACGGAT
GCCATTGCTGATGACTACTATGCTGTTTTGGGATTGCTTCCGGATGCTAC
ACCAGAGCAGATCAAGAAAGCTTACTATAATTGCATGAAAGCATGCCATC
CCGATTTAAGTGGCGATGATCCGGAGACCACAAATTTCTGCATGTTCATT
AATGAGGTTTATGCGGTTCTCAGTGACCCGGTGCAGCGGATGGTTTATGA
TGAAATTCACGGTTATTCATTGATTGCAACCAATCCTTTCTTGGATGATT
CCTGCCCCAAGGATCATGTGTTTGTTGATGAGTTTAGTTGCATAGGCTGT
AAAAATTGTAACAACGTGGCCCCAGAAGTTTTTAAAATTGAAGAGGACTT
TGGAAGAGCAAGAGTGTACAACCAGTGTGGAATCAATGAATTTGTTCAAC
AAGCAATTGAAAGTTGCCCAGTTGATTGCATTCATCGGACTTCTGCTCAA
CAGCTATCCCTGCTTGAAGACGAAATGCGTAGAGTAGAAAGAGTAAATGT
CGCCATGATGCTTTCAGGAA
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