EY690952

Overview
NameEY690952
Unique NameEY690952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690952 vs. ExPASy Swiss-Prot
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.393e-40
Identity = 80/115 (69.57%), Postives = 97/115 (84.35%), Query Frame = 1
Query:   13 AYGQAALFLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKVAIAYGLADKIIDSQDAAYEKRDYDMMLAQQ 357
            A+GQAA+ LS+G KGYR +QP+SSTKLYLP V RSSG   DMW KAK+L+AN E YIELLAKGTGK KE+I +DI+RPKY+QA+ AI YG+ADKI DSQD+++EKRDYD  LAQ+
Sbjct:  257 AFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADKIADSQDSSFEKRDYDGTLAQR 371          
BLAST of EY690952 vs. ExPASy Swiss-Prot
Match: CLPP_PHOLL (ATP-dependent Clp protease proteolytic subunit OS=Photorhabdus luminescens subsp. laumondii GN=clpP PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.097e-12
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 1
Query:   10 RAYGQAALFLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKVAIAYGLADKIIDSQD 312
            +A    A  L+ GAKG R   PNS   ++ P+ G   G  TD+   A+++        EL+AK TG+P EEIAKD +R +++ A  A+ YGL DKI   +D
Sbjct:  108 QACSMGAFLLTAGAKGKRICLPNSRVMIHQPL-GGFQGQATDIEIHAQEILKVKSRMNELMAKHTGRPIEEIAKDTERDRFLSADEAVEYGLVDKIFTHRD 207          
BLAST of EY690952 vs. ExPASy Swiss-Prot
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 35/105 (33.33%), Postives = 61/105 (58.10%), Query Frame = 1
Query:   13 AYGQAALFLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKVAIAYGLADKIIDSQDAAYEK 327
            A+G+AAL L+ GAKG R   P+S+  +  P+  R  G  TD+    K+++      ++L +K  GK  E+I  D++RPKY     A+ YG+ DK++ ++  + ++
Sbjct:  190 AWGEAALLLTAGAKGNRSALPSSTIMIKQPIA-RFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDR 293          
BLAST of EY690952 vs. ExPASy Swiss-Prot
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803) GN=clpR PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.774e-11
Identity = 36/99 (36.36%), Postives = 62/99 (62.63%), Query Frame = 1
Query:   10 RAYGQAALFLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKVAIAYGLADKIIDS 306
            +A G AA+ LS G KGYR   P+++  L     G + G  TD+  +AK++ +N ++ +E+L+  TG+ +E++AKD+ R  Y+    A  YGL D++++S
Sbjct:  117 QAMGTAAMILSSGTKGYRASLPHATIVLNQNRTG-AQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRTFYLTPAQAKEYGLIDRVLES 214          
BLAST of EY690952 vs. ExPASy Swiss-Prot
Match: CLPP_ELUMP (ATP-dependent Clp protease proteolytic subunit OS=Elusimicrobium minutum (strain Pei191) GN=clpP PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.774e-11
Identity = 37/100 (37.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:   10 RAYGQAALFLSVGAKGYRGLQPNSSTKLYLPVV--GRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKVAIAYGLADKIID 303
            +A    A+ L+ G+KG R   P++   ++ P++  G  SG VTD+  ++ +L  N E  +++LA  TG+ KE+I +D +R  YM A+ A AYGL D+++D
Sbjct:   93 QAMSFGAVLLAAGSKGKRYALPHARIMIHQPLIWGGGISGQVTDIEIESNELRKNKEHLLDILAHHTGQDKEKIRQDSERNYYMSAQEAKAYGLIDEVLD 192          
BLAST of EY690952 vs. ExPASy Swiss-Prot
Match: CLPPL_CYAPA (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Cyanophora paradoxa GN=clpP-B PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.774e-11
Identity = 38/97 (39.18%), Postives = 55/97 (56.70%), Query Frame = 1
Query:   13 AYGQAALFLSVGAKGYRGLQPNSSTKLYLPVV-GRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKVAIAYGLADKII 300
            A G ++L L+ G KG R   PNS   +  P++ G  +G  TD+  +AK+L    E  I L  + TG+PK  I KD+QRP+Y  A+ A  YG  D ++
Sbjct:   98 AGGMSSLILAAGTKGQRFALPNSRIMMQEPLIDGGVNGQATDLAIEAKELMDTKEILINLYHERTGQPKPVIEKDLQRPRYFSAQAAKEYGFIDSLL 194          
BLAST of EY690952 vs. ExPASy Swiss-Prot
Match: CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) GN=clpR PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.162e-11
Identity = 35/100 (35.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query:   10 RAYGQAALFLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKVAIAYGLADKIIDSQ 309
            +A G AA+ LS G  G R   P+++  L  P  G + G  +D+  +AK++ AN  + +E+ A+ TG+  + +A+D  R  YM    A+ YGL D+++DS+
Sbjct:  119 QAMGTAAMILSGGTPGNRASLPHATIVLNQPRTG-AQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRMLYMTPAQAVEYGLIDRVLDSR 217          
BLAST of EY690952 vs. ExPASy Swiss-Prot
Match: CLPP_AQUAE (ATP-dependent Clp protease proteolytic subunit OS=Aquifex aeolicus GN=clpP PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.162e-11
Identity = 37/101 (36.63%), Postives = 60/101 (59.41%), Query Frame = 1
Query:   10 RAYGQAALFLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKVAIAYGLADKIIDSQD 312
            +A    A+ L+ GA G R   P+S   ++ P+ G   G  TD+   A++++   E  I++LAK TG+PK++IA DI+R  +M    A  YGL DK+I+ ++
Sbjct:  102 QAASMGAILLAAGAPGKRYALPHSRIMIHQPL-GGIQGQATDIIIHAEEIKRIKEMLIDILAKHTGQPKDKIANDIERDYFMSPYEAKDYGLIDKVIEKRE 201          
BLAST of EY690952 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.805e-11
Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 1
Query:   13 AYGQAALFLSVGAKGYRGLQPNSSTKLYLPVVGRSSG--PVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKVAIAYGLADKII 300
            A GQA L LS G KG R + P++   +  P V  SSG  P +D+  +AK++  N +  +ELL+K TG   E +A  ++RP YM A  A  +G+ D+I+
Sbjct:  207 AIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVP-SSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRIL 303          
BLAST of EY690952 vs. ExPASy Swiss-Prot
Match: CLPP_DESMR (ATP-dependent Clp protease proteolytic subunit OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=clpP PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.805e-11
Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 1
Query:   10 RAYGQAALFLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKVAIAYGLADKIIDSQDAAYEKRD 333
            +A    AL L  GA G R   P+S   ++ P  G   G  TD+   AK+     E+  E++AK TG+  E I  D +R  +M A+ A+AYGL DK++ S++   EK+D
Sbjct:   95 QAASMGALLLCAGATGMRYALPHSRIMIHQPS-GGYQGQATDIEIHAKETRRTRETLNEIMAKHTGQSMERIQVDTERDNFMSAEEAVAYGLIDKVLTSRE-RLEKKD 200          
The following BLAST results are available for this feature:
BLAST of EY690952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CLPR1_ARATH1.393e-4069.57ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPP_PHOLL6.097e-1239.60ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPR4_ARATH1.040e-1133.33ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPR_SYNY31.774e-1136.36Putative ATP-dependent Clp protease proteolytic su... [more]
CLPP_ELUMP1.774e-1137.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPPL_CYAPA1.774e-1139.18Putative ATP-dependent Clp protease proteolytic su... [more]
CLPR_SYNE75.162e-1135.00Putative ATP-dependent Clp protease proteolytic su... [more]
CLPP_AQUAE5.162e-1136.63ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPR3_ARATH8.805e-1139.80ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPP_DESMR8.805e-1137.04ATP-dependent Clp protease proteolytic subunit OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-101-E07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690952 ID=EY690952; Name=EY690952; organism=Citrus sinensis; type=EST; length=490bp
CCACGCGTCCGGGCATATGGTCAAGCAGCACTGTTTCTATCTGTTGGAGC
AAAGGGTTACCGCGGTTTACAGCCAAATTCTTCCACAAAATTGTATTTGC
CTGTCGTTGGTAGGTCAAGTGGGCCCGTTACTGACATGTGGCGTAAGGCC
AAAGATCTAGAAGCAAACGCTGAAAGCTACATTGAGCTATTAGCAAAAGG
AACAGGAAAACCCAAGGAAGAAATTGCTAAAGACATCCAACGACCTAAAT
ACATGCAAGCAAAAGTAGCTATAGCGTATGGCCTTGCAGACAAGATAATC
GACTCACAGGATGCAGCATATGAAAAACGGGATTACGATATGATGCTTGC
TCAACAAATGTCCATGTACTAAGTCTTTCTTAATAAATAAAATTATTCCG
TGTCAATGTGTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
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