FC871465

Overview
NameFC871465
Unique NameFC871465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length323
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1944 contig Csv1_Contig1944:605..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871465 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 7.323e-22
Identity = 49/65 (75.38%), Postives = 61/65 (93.85%), Query Frame = 1
Query:    1 LRYDLYTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 195
            LRYDL T+ISAKPK+EKQSLK+LT KLFQTI NLD+AA+ KS+P+AEKYY+ETVS+LN+VL+K+G
Sbjct:  166 LRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKLG 230          
BLAST of FC871465 vs. ExPASy Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.804e-20
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 1
Query:    1 LRYDLYTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 195
            LRYDL T+ISAKPKDEK+SL+ LT KLF +I NLDHAAKIKS  EAEKYY +TVS +N+VL+K+G
Sbjct:  168 LRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINEVLAKLG 232          
BLAST of FC871465 vs. ExPASy Swiss-Prot
Match: PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.804e-20
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 1
Query:    1 LRYDLYTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 195
            LRYDL T+I++KPK+EK+SLK LTGKLF TI +LDHAAKIKSTPEAEKY+A T   L DVL+K+G
Sbjct:  153 LRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKLG 217          
BLAST of FC871465 vs. ExPASy Swiss-Prot
Match: PSBQ_ONOVI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis viciifolia GN=PSBQ PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.077e-20
Identity = 48/66 (72.73%), Postives = 58/66 (87.88%), Query Frame = 1
Query:    1 LRYDLYTIISAKPKDEKQSLKNLT-GKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 195
            LRYDL T+IS+KPK++KQSLK  + GKLFQ I NLD+AAK+KS P+AEKYYA+ VSTLNDVLSK+G
Sbjct:  166 LRYDLNTVISSKPKEQKQSLKESSAGKLFQDIDNLDYAAKLKSAPQAEKYYADAVSTLNDVLSKIG 231          
BLAST of FC871465 vs. ExPASy Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 3.077e-20
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 1
Query:    1 LRYDLYTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 195
            LRYDL TIIS+KPKDEK+SLK+LT KLF TI NLD+AAK KS  +AEKYYAETVS LN+VL+K+G
Sbjct:  160 LRYDLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224          
BLAST of FC871465 vs. ExPASy Swiss-Prot
Match: PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.018e-20
Identity = 46/65 (70.77%), Postives = 56/65 (86.15%), Query Frame = 1
Query:    1 LRYDLYTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 195
            LRYDL T+I++KPK+EK+SLK LTGKLF TI +LDHAAK+KSTPEAEKY+A T   L DVL+K+G
Sbjct:  149 LRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDALGDVLAKLG 213          
BLAST of FC871465 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.802e-19
Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 1
Query:    1 LRYDLYTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 195
            LRYDL T+I++KPKDEK+ LK+LTGKLF TI  LDHAAKIKS  EAEKYY  T S L DVL+K+G
Sbjct:  153 LRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217          
BLAST of FC871465 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 5.802e-19
Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 1
Query:    1 LRYDLYTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 195
            LRYDL T+I++KPKDEK+ LK+LTGKLF TI  LDHAAKIKS  EAEKYY  T S L DVL+K+G
Sbjct:  153 LRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217          
The following BLAST results are available for this feature:
BLAST of FC871465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PSBQ2_ARATH7.323e-2275.38Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
PSBQ_SPIOL1.804e-2072.31Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ1_MAIZE1.804e-2072.31Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ_ONOVI3.077e-2072.73Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ1_ARATH3.077e-2075.38Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ2_MAIZE4.018e-2070.77Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
PSBQ_ORYSJ5.802e-1970.77Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ_ORYSI5.802e-1970.77Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2DB01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2DB01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871465 ID=FC871465; Name=FC871465; organism=Citrus sinensis; type=EST; length=323bp
CTTCGCTATGACCTCTACACTATCATTTCTGCTAAGCCCAAAGATGAGAA
ACAATCCCTCAAGAACCTCACTGGAAAGCTCTTCCAGACCATCGGCAATC
TTGACCATGCGGCAAAGATTAAGAGCACTCCTGAAGCAGAGAAATACTAT
GCTGAGACTGTATCTACCCTGAACGATGTTCTCTCCAAGGTTGGCTAAGC
AGAATTAATATAATCTGATGTAAACTATATTTTTCATTTTGTGAGGCAAC
AACTTCTGTGAATTTTATTGCAAGCTGGCGTTCCGCTCAAAGTATCGAAA
AAAAAAAAAAAAAAAAAAAAAAA
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